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Microbial genomics

Comparative analysis of skin microbiome of patients with filarial lymphedema and healthy individuals

Sowmiya Manavalan, Devu Pradeep, Danapriyaa Dharmalingam, Janani Semalaiyappan, Thamizhpraba Sivarasan, Shakila Venkatesan, Sankari Thirumal, Vijesh Sreedhar Kuttiatt

published 02 Jul 2025

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Maternal gut microbiome interventions to improve maternal and perinatal health outcomes: Target product profile expert consensus and pipeline analysis

Kate Mills, Joelle Tan, Tahlia Guneratne, Lindsay Keir, Maya Goldstein, Cécile Ventola, Maureen Makama, Anne Ammerdorffer, A. Metin Gülmezoglu, Joshua P. Vogel, Annie R. A. McDougall

published 02 Jul 2025

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Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, Guendouz Dif, Fawzia Chaabane Chaouch, Sherif S. Ebada

published 01 Jul 2025

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Serratia sp. traits distinguish the lung microbiome of patients with tuberculosis and non-tuberculous mycobacterial lung diseases

Meriem Belheouane, Barbara Kalsdorf, Stefan Niemann, Karoline I. Gaede, Christoph Lange, Jan Heyckendorf, Matthias Merker

published 26 Jun 2025

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The effects of rifaximin and lactulose on the gut-liver-brain axis in rats with minimal hepatic encephalopathy

Xueyan Lin, Zhengchao Zhang, Yi Lin, Shiyun Lu, Rongrong Chen

published 17 Jun 2025

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Comparative genomics of Lentilactobacillus buchneri reveals strain-level hyperdiversity and broad-spectrum CRISPR immunity against human and livestock gut phages

Ismail Gumustop, Ibrahim Genel, Ibrahim Cagri Kurt, Fatih Ortakci

published 10 Jun 2025

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Effects of sake lees intake on fecal uremic toxins, plasma D-alanine, constipation, and gut microbiome in healthy adults: A single-arm clinical trial

Toshiaki Tokumaru, Tadashi Toyama, Yusuke Nakade, Hisayuki Ogura, Megumi Oshima, Shiori Nakagawa, Masashi Mita, Taro Miyagawa, Shinji Kitajima, Akinori Hara, Norihiko Sakai, Miho Shimizu, Yasunori Iwata, Takashi Wada

published 03 Jun 2025

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Gut microbiota and its influence on the Gut-Brain axis in comparison with chemotherapy patients and cancer-free control data in Breast cancer—A computational perspective

Tamizhini Loganathan, George Priya Doss C

published 03 Jun 2025

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Diversity analysis of oral and gut microbiota in osteoporotic rats

Mingzhu Chen, Zihan Liao, Zhenjin Yang, Yanjie Li, Liya Ma, Jiangtian Hu

published 03 Jun 2025

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Assessing changes to the fecal microbiota in dogs undergoing elective orthopedic surgery: A preliminary investigation

Allison J. Collier, Diego E. Gomez, Melissa A. MacIver, Adronie Verbrugghe, J. Scott Weese, Shauna L. Blois

published 02 Jun 2025

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A study protocol for neonatal sepsis and gut microbiomics among preterm infants admitted at Muhimbili National Hospital, Tanzania

Fatima M. Mussa, Agricola Joachim, Robert Moshiro, Salim S. Masoud, Marylyn M. Addo, Julia Pagel, Ralf Krumkamp, Robin Kobbe, Nahya Salim

published 02 Jun 2025

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Schistosoma mansoni infection causes consistent changes to the fecal bacterial microbiota of mice across and within sites

Mariam A. Mhanna, David T. Gauthier, Lisa M. Shollenberger

published 30 May 2025

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Evaluation of metatranscriptomic sequencing protocols to obtain full-length RNA virus genomes from mammalian tissues

Yiqiao Li, Mariana Polychronopoulou, Ine Boonen, Antonios Fikatas, Sophie Gryseels, Anne Laudisoit, Joelle Gouy de Bellocq, Bram Vrancken, Gkikas Magiorkinis, Philippe Lemey, Magda Bletsa

published 30 May 2025

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