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Metabolic networks

Signal hierarchical petri nets: Formal semantics of hierarchical regulatory control of biological systems

Eugênio Simão

published 21 Aug 2026

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Metabolomic profiling of backfat in Ningxiang pigs reveals lipid dynamics and carcass trait associations during the fattening stage

Yu Chen, Lihua Cao, Qingming Cui, Yuan Deng, Ji Zhu, Yingying Liu, Huali Li, Huibo Ren, Xionggui Hu, Xiaogang Zhao, Xinglong He, Huiming Wang, Wenmei Wang, Yinglin Peng, Chen Chen

published 22 Jul 2026

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Key targets and mechanisms by which gut microbiota-derived metabolites regulate Alzheimer’s disease through the immune - inflammatory pathway: Based on network pharmacology and molecular docking

Lei Miao, Fengwei Hou, Guanghong Li

published 06 Jul 2026

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Pairwise causal discovery in biochemical networks: A survey on directionality inference within complex networks from stationary observations

Nava Leibovich, Miroslava Cuperlovic-Culf

published 16 Jun 2026

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Non-targeted metabolomics reveals myocardial metabolic alterations in epileptic rats

Yue Hu, Yusen Wang, Qinghong Mao, Shisheng Zhu, Li Zhang

published 21 May 2026

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The identification of metabolites from gut microbiota in HPV infection via network pharmacology

Wenbo Dong, Bai Li, Zhiwei Xu, Qi Wang, Zhihui Hou, Hongling Jia

published 10 Apr 2026

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Dynamic metabolic modeling of Streptomyces clavuligerus in complex medium highlights nutrient-dependent metabolic transitions associated with clavulanic acid biosynthesis

Leon F. Toro-Navarro, Laura Pinilla-Mendoza, Rigoberto Ríos-Estepa

published 02 Feb 2026

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Reconstruction of a genome-scale metabolic model for Streptococcus zooepidemicus: Comparison with Corynebacterium glutamicum to study hyaluronic acid production

Zahra Nikuiyan, Fatemeh Tabandeh, Ehsan Motamedian, Saeed Salehi, Marjan Talebi, Rouzbeh Almasi Ghale

published 31 Dec 2025

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Integrative transcriptomics analysis reveals the metabolic regulatory functions of lncRNA in the livers of yak at different age stages

Hongsen Fu, Wei Xia, Fang Fu, Jun Yi, Wei Wang, Yong Wei, Li Wang

published 08 Oct 2025

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New insights into the molecular biology of Alzheimer’s-like cerebral amyloidosis achieved through multi‐omics approaches

Lorenzo Campanelli, Juan M. Sendoya, Scott Brody, Pablo Galeano, Sonia Do Carmo, A. Claudio Cuello, Eduardo M. Castaño, Andrés Gonzalés-Jimenez, Julia Verheul, Dina Medina-Vera, Fernando Rodríguez de Fonseca, Rasmus Wernersson, Laura Morelli

published 03 Sep 2025

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Industrial metabolism of iron and carbon with substance flow analysis in iron and steel industry

Junwen Chen, Qing Sun

published 07 Aug 2025

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Unraveling the metabolic landscape of Exophiala spinifera strain FM: Model reconstruction, insights into biodesulfurization and beyond

Hamta Babaei Naeij, Zahra Etemadifar, John Kilbane, Mohammad Hossein Karimi-Jafari, Sepideh Mofidifar

published 29 Jan 2025

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Extraction efficiency and bioactive evaluation of Tamarix nilotica and Arthrocnemum macrostachyum extracts for anti-cancer potential

Maryam Al Kaabi, Nancy A. ElNaker, Nila Jan, Michael A. Ochsenkühn, Shady A. Amin, Lina F. Yousef, Ahmed F. Yousef

published 21 Jan 2025

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