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Markov models

MixHMM: Inferring Copy Number Variation and Allelic Imbalance Using SNP Arrays and Tumor Samples Mixed with Stromal Cells

Zongzhi Liu, Ao Li, [ ... ], David Tuck

Computational Protein Design: Validation and Possible Relevance as a Tool for Homology Searching and Fold Recognition

Marcel Schmidt am Busch, Audrey Sedano, Thomas Simonson

Efficient and Exact Sampling of Simple Graphs with Given Arbitrary Degree Sequence

Charo I. Del Genio, Hyunju Kim, Zoltán Toroczkai, Kevin E. Bassler

Detection and Architecture of Small Heat Shock Protein Monomers

Pierre Poulain, Jean-Christophe Gelly, Delphine Flatters

Abundant Oligonucleotides Common to Most Bacteria

Colin F. Davenport, Burkhard Tümmler

Statistical Analysis of the Indus Script Using n-Grams

Nisha Yadav, Hrishikesh Joglekar, [ ... ], Iravatham Mahadevan

Calculation of Disease Dynamics in a Population of Households

Joshua V. Ross, Thomas House, Matt J. Keeling

Evolutionary Divergence in Brain Size between Migratory and Resident Birds

Daniel Sol, Núria Garcia, [ ... ], Tamás Székely

Bayesian Markov Random Field Analysis for Protein Function Prediction Based on Network Data

Yiannis A. I. Kourmpetis, Aalt D. J. van Dijk, [ ... ], Cajo J. F. ter Braak

Differential Expression of hERG1 Channel Isoforms Reproduces Properties of Native I_Kr and Modulates Cardiac Action Potential Characteristics

Anders Peter Larsen, Søren-Peter Olesen

Genome-Wide Analysis of Binding Sites and Direct Target Genes of the Orphan Nuclear Receptor NR2F1/COUP-TFI

Celina Montemayor, Oscar A. Montemayor, [ ... ], Fred A. Pereira

Two Forms of Activation-Induced Cytidine Deaminase Differing in Their Ability to Bind Agarose

Mirjam Metzner, Wolfgang Schuh, [ ... ], Matthias Wabl

Effective Identification of Conserved Pathways in Biological Networks Using Hidden Markov Models

Xiaoning Qian, Byung-Jun Yoon

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