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Markov models

Evolutionary Distances in the Twilight Zone—A Rational Kernel Approach

Roland F. Schwarz, William Fletcher, [ ... ], Florian Markowetz

A Novel HMM-Based Method for Detecting Enriched Transcription Factor Binding Sites Reveals RUNX3 as a Potential Target in Pancreatic Cancer Biology

Liron Levkovitz, Nir Yosef, [ ... ], Yoram Oron

Feller Processes: The Next Generation in Modeling. Brownian Motion, Lévy Processes and Beyond

Björn Böttcher

Single-Molecule Analysis Reveals the Kinetics and Physiological Relevance of MutL-ssDNA Binding

Jonghyun Park, Yongmoon Jeon, [ ... ], Jong-Bong Lee

HMMSplicer: A Tool for Efficient and Sensitive Discovery of Known and Novel Splice Junctions in RNA-Seq Data

Michelle T. Dimon, Katherine Sorber, Joseph L. DeRisi

Genome-Wide Identification of HrpL-Regulated Genes in the Necrotrophic Phytopathogen Dickeya dadantii 3937

Shihui Yang, Quan Peng, [ ... ], Ching-Hong Yang

Pacific Salmon and the Coalescent Effective Population Size

Can Cenik, John Wakeley

A Score of the Ability of a Three-Dimensional Protein Model to Retrieve Its Own Sequence as a Quantitative Measure of Its Quality and Appropriateness

León P. Martínez-Castilla, Rogelio Rodríguez-Sotres

An Economic Evaluation of Home Management of Malaria in Uganda: An Interactive Markov Model

Yoel Lubell, Anne J. Mills, Christopher J. M. Whitty, Sarah G. Staedke

Novel Association Strategy with Copy Number Variation for Identifying New Risk Loci of Human Diseases

Xianfeng Chen, Xinlei Li, [ ... ], Xiangyin Kong

Mechanical Characterization of One-Headed Myosin-V Using Optical Tweezers

Tomonobu M. Watanabe, Atsuko H. Iwane, [ ... ], Toshio Yanagida

Correcting the Bias of Empirical Frequency Parameter Estimators in Codon Models

Sergei Kosakovsky Pond, Wayne Delport, Spencer V. Muse, Konrad Scheffler

Evolution of Cooperation on Stochastic Dynamical Networks

Bin Wu, Da Zhou, [ ... ], Arne Traulsen

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