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Macromolecular structure analysis

DMS-informed secondary structure modeling of Epstein–Barr Virus LMP-1 pre-mRNA defines novel elements spanning introns

Taylor O. Eich, Evelyn C. Coppenbarger, Abdelraouf O. Dapour, Walter N. Moss

published 02 Jul 2026

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Design and evaluation of a novel fusion antigen for diagnosing human strongyloidiasis: An immunoinformatics approach

Marzieh Asadi, Sina Taghvimi, Ghazal Ghaznavi, Halime Parsaee, Mehdi Mohsenzadeh, Bahador Sarkari, Mohammad Jafari, Amir Savardashtaki

published 25 Jun 2026

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Enhanced IGFL1 translation in response to IL-1β is controlled by distinct 3’UTR elements

Giulia Cardamone, Melanie Flohr, Rebecca Raue, Irina Bode, Sofie P. Meyer, Sven Hauns, Rolf Backofen, Tobias Schmid

published 25 Jun 2026

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Pan-genome and reverse vaccinology for a multi-epitope vaccine against circulating post-2022 Monkeypox virus strains

Md Al Saber, Md. Hasan Jafre Shovon, Md. Imtiaz, Sadia Jannat Tauhida, Sowmitro Das, Md Mohaimenul Islam Tareq, Miss Ismoth Ara Tripty, Md Ridoy Hossain, Labib Shahriar Siam, Md Nazmul Hasan Zilani, Saifullah, S.M. Khaledur Rahman, Umama Khan, Md Nazmul Hasan

published 22 Jun 2026

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GARN3: A coarse-grained helix centered technique for RNA 3D structures prediction

Jhonatan Silva, Johanne Cohen, Daniel Cordeiro

published 22 Jun 2026

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Prediction of pre- and postfusion conformations of class I fusion proteins with AlphaFold2

Sevilay Gülesen, Victoria Most, Clara T. Schoeder, Jens Meiler

published 16 Jun 2026

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Structural bioinformatic studies of eight integral transmembrane NADPH oxidases and their AlphaFold 3 predicted QTY analogs with reduced hydrophobicity

Tutu Hu, Rick Cheng, Edward Chen, Shuguang Zhang

published 10 Jun 2026

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Predicting unknown binding sites for transition-metal-based compounds in proteins

Andrea Levy, Ursula Rothlisberger

published 09 Jun 2026

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Large-scale statistical dissection of sequence-derived biochemical features distinguishing soluble and insoluble proteins

Nguyen Huy Hoang Vu, Bao Long Nguyen

published 05 Jun 2026

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Solution structure of mouse HBS1L/SKI7-specific UBA domain in complex with ubiquitin: Implications for stalled ribosome recognition

Nobukazu Nameki, Fahu He, Minako Okada, Mari Takahashi, Kengo Tsuda, Takashi Nagata, Peter Güntert, Naohiro Kobayashi, Takanori Kigawa, Mikako Shirouzu, Akiko Tanaka, Shigeyuki Yokoyama, Yutaka Muto, Kanako Kuwasako

published 03 Jun 2026

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Comparative unfolding of the Trp-cage miniprotein in anionic and cationic surfactants

Osita Sunday Nnyigide, Haewon Byeon, Uchenna Esther Okpete

published 03 Jun 2026

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In silico pharmacological analysis of Tinospora cordifolia compounds targeting African swine fever virus B175L

Kasuni Karunarathne, Saumya Poorni, Nethra Jayampathi, Hasitha Dhananjaya, Anju Hasintha, Malinda Hulugalla, Thilini A.N. Mahakapuge, Nadeeka Nethmini, Naveed Iqbal, Barana Jayawardana, Lakmal Ranathunga

published 03 Jun 2026

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A Lipoxygenase 3 mutation reverses growth phenotypes in an Arabidopsis Plastid Lipase 3 overexpression line

Yosia Mugume, Ron Cook, Breana Hagerty, Jinjie Liu, Zachary B. Alvord, Linda Danhof, John E. Froehlich, Josh V. Vermaas, Christoph Benning

published 02 Jun 2026

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