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Intrinsically disordered proteins

QuPepFold: A python package for hybrid quantum-classical protein folding simulations with CVaR-optimized VQE

Akshay Uttarkar, Vidya Niranjan, Amit Saxena, Vinay Kumar

published 11 Feb 2026

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Structural disorder and distinctive motifs in the C-terminal region of the MADS-domain transcription factors are conserved across diverse taxa

Erandi Ramírez-Aguirre, Teresa Beatriz Nava-Ramírez, Alejandra A. Covarrubias, Adriana Garay-Arroyo

published 22 Aug 2025

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PUNCH2: Explore the strategy for intrinsically disordered protein predictor

Di Meng, Gianluca Pollastri

published 26 Mar 2025

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AlphaFold2 modeling and molecular dynamics simulations of an intrinsically disordered protein

Hao-Bo Guo, Baxter Huntington, Alexander Perminov, Kenya Smith, Nicholas Hastings, Patrick Dennis, Nancy Kelley-Loughnane, Rajiv Berry

published 13 May 2024

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Divide, conquer and reconstruct: How to solve the 3D structure of recalcitrant Micro-Exon Gene (MEG) protein from Schistosoma mansoni

Stepanka Nedvedova, Florence Guillière, Adriana Erica Miele, François-Xavier Cantrelle, Jan Dvorak, Olivier Walker, Maggy Hologne

published 03 Aug 2023

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The difficulty of aligning intrinsically disordered protein sequences as assessed by conservation and phylogeny

Andrew C. Riley, Daniel A. Ashlock, Steffen P. Graether

published 13 Jul 2023

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Identification and characterization of epicuticular proteins of nematodes sharing motifs with cuticular proteins of arthropods

Bruno Betschart, Marco Bisoffi, Ferial Alaeddine

published 27 Oct 2022

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New insights into disordered proteins and regions according to the FOD-M model

Irena Roterman, Katarzyna Stapor, Piotr Fabian, Leszek Konieczny

published 10 Oct 2022

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idpr: A package for profiling and analyzing Intrinsically Disordered Proteins in R

William M. McFadden, Judith L. Yanowitz

published 18 Apr 2022

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Intrinsically disordered signaling proteins: Essential hub players in the control of stress responses in Saccharomyces cerevisiae

Leidys French-Pacheco, Omar Rosas-Bringas, Lorenzo Segovia, Alejandra A. Covarrubias

published 15 Mar 2022

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¹H, ¹³C and ¹⁵N resonance assignment of the SARS-CoV-2 full-length nsp1 protein and its mutants reveals its unique secondary structure features in solution

Tatiana Agback, Francisco Dominguez, Ilya Frolov, Elena I. Frolova, Peter Agback

published 07 Dec 2021

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Skeletal development in the sea urchin relies upon protein families that contain intrinsic disorder, aggregation-prone, and conserved globular interactive domains

Martin Pendola, Gaurav Jain, John Spencer Evans

published 01 Oct 2019

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Intrinsically disordered proteins and structured proteins with intrinsically disordered regions have different functional roles in the cell

Antonio Deiana, Sergio Forcelloni, Alessandro Porrello, Andrea Giansanti

published 19 Aug 2019

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