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Human genomics

Enzyme-Free Detection of Mutations in Cancer DNA Using Synthetic Oligonucleotide Probes and Fluorescence Microscopy

Laura Miotke, Arindam Maity, [ ... ], Kira Astakhova

Increasing Nucleosome Occupancy Is Correlated with an Increasing Mutation Rate so Long as DNA Repair Machinery Is Intact

Puya G. Yazdi, Brian A. Pedersen, [ ... ], Ping H. Wang

Evolution of Vertebrate Adam Genes; Duplication of Testicular Adams from Ancient Adam9/9-like Loci

Harinath Bahudhanapati, Shashwati Bhattacharya, Shuo Wei

MAFsnp: A Multi-Sample Accurate and Flexible SNP Caller Using Next-Generation Sequencing Data

Jiyuan Hu, Tengfei Li, Zidi Xiu, Hong Zhang

Genome-Wide Profiling of PARP1 Reveals an Interplay with Gene Regulatory Regions and DNA Methylation

Narasimharao Nalabothula, Taha Al-jumaily, [ ... ], Yvonne N. Fondufe-Mittendorf

Boundary Associated Long Noncoding RNA Mediates Long-Range Chromosomal Interactions

Ifeoma Jane Nwigwe, Yoon Jung Kim, David A. Wacker, Tae Hoon Kim

CNV-CH: A Convex Hull Based Segmentation Approach to Detect Copy Number Variations (CNV) Using Next-Generation Sequencing Data

Rituparna Sinha, Sandip Samaddar, Rajat K. De

ExScalibur: A High-Performance Cloud-Enabled Suite for Whole Exome Germline and Somatic Mutation Identification

Riyue Bao, Kyle Hernandez, [ ... ], Jorge Andrade

GREAM: A Web Server to Short-List Potentially Important Genomic Repeat Elements Based on Over-/Under-Representation in Specific Chromosomal Locations, Such as the Gene Neighborhoods, within or across 17 Mammalian Species

Darshan Shimoga Chandrashekar, Poulami Dey, Kshitish K. Acharya

Two Virus-Induced MicroRNAs Known Only from Teleost Fishes Are Orthologues of MicroRNAs Involved in Cell Cycle Control in Humans

Brian Dall Schyth, Dennis Berbulla Bela-ong, [ ... ], Niels Lorenzen

Indexing Arbitrary-Length k-Mers in Sequencing Reads

Tomasz Kowalski, Szymon Grabowski, Sebastian Deorowicz

elPrep: High-Performance Preparation of Sequence Alignment/Map Files for Variant Calling

Charlotte Herzeel, Pascal Costanza, [ ... ], Joke Reumers

The Relationship between Runs of Homozygosity and Inbreeding in Jersey Cattle under Selection

Eui-Soo Kim, Tad S. Sonstegard, [ ... ], Max F. Rothschild

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