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Human genomics

Platform-Independent Genome-Wide Pattern of DNA Copy-Number Alterations Predicting Astrocytoma Survival and Response to Treatment Revealed by the GSVD Formulated as a Comparative Spectral Decomposition

Katherine A. Aiello, Orly Alter

Computational Analysis of G-Quadruplex Forming Sequences across Chromosomes Reveals High Density Patterns Near the Terminal Ends

Julia H. Chariker, Donald M. Miller, Eric C. Rouchka

Discriminative Prediction of A-To-I RNA Editing Events from DNA Sequence

Jiangming Sun, Yang De Marinis, [ ... ], Hindrik Mulder

Filtration and Normalization of Sequencing Read Data in Whole-Metagenome Shotgun Samples

Philippe Chouvarine, Lutz Wiehlmann, [ ... ], Burkhard Tümmler

The Transcriptome of Rhabdomyosarcoma Cells Infected with Cytolytic and Non-Cytolytic Variants of Coxsackievirus B2 Ohio-1

Anna Sävneby, Johannes Luthman, [ ... ], A. Michael Lindberg

High-Throughput Analysis of Global DNA Methylation Using Methyl-Sensitive Digestion

Hiromi Shiratori, Carmen Feinweber, [ ... ], Eduard Resch

Discrimination of Deletion and Duplication Subtypes of the Deleted in Azoospermia Gene Family in the Context of Frequent Interloci Gene Conversion

Tibor Vaszkó, János Papp, [ ... ], Edith Olah

SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation

Wei Shen, Shuai Le, Yan Li, Fuquan Hu

Revisiting the Phylogeny of the Animal Formins: Two New Subtypes, Relationships with Multiple Wing Hairs Proteins, and a Lost Human Formin

David Pruyne

Genome-Wide Association Study of HIV Whole Genome Sequences Validated using Drug Resistance

Robert A. Power, Siva Davaniah, [ ... ], Tulio de Oliveira

LMethyR-SVM: Predict Human Enhancers Using Low Methylated Regions based on Weighted Support Vector Machines

Jingting Xu, Hong Hu, Yang Dai

Fire Usage and Ancient Hominin Detoxification Genes: Protective Ancestral Variants Dominate While Additional Derived Risk Variants Appear in Modern Humans

Jac M. M. J. G. Aarts, Gerrit M. Alink, [ ... ], Wil Roebroeks

MicroRNA Stability in FFPE Tissue Samples: Dependence on GC Content

Yu Kakimoto, Masayuki Tanaka, [ ... ], Motoki Osawa

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