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Human genomics

Positional distribution of transcription factor binding sites in the human genome

Chun-Ping Yu, Zhi Thong Soh, Maloyjo Joyraj Bhattacharjee, Wen-Hsiung Li

Dissecting cell-free DNA fragmentation variation in tumors using cell line-derived xenograft mouse

Ruiqing Fu, He Amy Su, [ ... ], Daru Lu

Rationale and study protocol of the MAMELI Cohort study (Mapping the Methylation of repetitive elements to track the Exposome effects on health: the city of Legnano as a Living lab)

Valentina Bollati, Federica Rota, [ ... ], Elia Biganzoli

Short tandem repeat variants are possibly associated with RNA secondary structure and gene expression

Nick Kinney, Dikshya Pathak, Emma Evans, Paola Arias

Host-pathogen protein interaction studies: quality control of cDNA libraries using nanopore sequencing

Cécile Schimmich, Mathilde Gondard, [ ... ], François Piumi

Utilizing a deep learning model based on BERT for identifying enhancers and their strength

Tong Wang, Mengqi Gao

An updated compendium and reevaluation of the evidence for nuclear transcription factor occupancy over the mitochondrial genome

Georgi K Marinov, Vivekanandan Ramalingam, William J Greenleaf, Anshul Kundaje

Detection of hepatitis B virus mRNA from single cell RNA sequencing data without prior knowledge

Nicolaas Van Renne, Thomas Vanwolleghem

Comparisons of performances of structural variants detection algorithms in solitary or combination strategy

De-Min Duan, Chinyi Cheng, [ ... ], Pei-Lung Chen

A genomics learning framework for undergraduates

Laura K. Reed, Adam J. Kleinschmit, [ ... ], Anne Rosenwald

Hypermethylation at 45S rDNA promoter in cancers

Trang Thi Quynh Tran, Trang Hien Do, [ ... ], Lan Thi Thuong Vo

An appropriate DNA input for bisulfite conversion reveals LINE-1 and Alu hypermethylation in tissues and circulating cell-free DNA from cancers

Trang Thi Quynh Tran, Tung The Pham, [ ... ], Lan Thi Thuong Vo

Comparative analysis of whole exome sequencing kits for the canine genome

Jinhee Jang, Yong-Jik Lee, [ ... ], Tae Woo Jung

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