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Hidden Markov models

Identification and Gene Expression Analysis of a Taxonomically Restricted Cysteine-Rich Protein Family in Reef-Building Corals

Shinichi Sunagawa, Michael K. DeSalvo, Christian R. Voolstra, Alejandro Reyes-Bermudez, Mónica Medina

published 13 Mar 2009

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Dissecting Nucleosome Free Regions by a Segmental Semi-Markov Model

Wei Sun, Wei Xie, Feng Xu, Michael Grunstein, Ker-Chau Li

published 06 Mar 2009

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Conservation of Helical Bundle Structure between the Exocyst Subunits

Nicole J. Croteau, Melonnie L. M. Furgason, Damien Devos, Mary Munson

published 13 Feb 2009

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Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

published 03 Feb 2009

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A Nitrile Hydratase in the Eukaryote Monosiga brevicollis

Konrad U. Foerstner, Tobias Doerks, Jean Muller, Jeroen Raes, Peer Bork

published 19 Dec 2008

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FastBLAST: Homology Relationships for Millions of Proteins

Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin

published 31 Oct 2008

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Analyses and Comparison of Accuracy of Different Genotype Imputation Methods

Yu-Fang Pei, Jian Li, Lei Zhang, Christopher J. Papasian, Hong-Wen Deng

published 29 Oct 2008

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A Computational Screen for Type I Polyketide Synthases in Metagenomics Shotgun Data

Konrad U. Foerstner, Tobias Doerks, Christopher J. Creevey, Anja Doerks, Peer Bork

published 27 Oct 2008

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A Functional Gene Array for Detection of Bacterial Virulence Elements

Crystal Jaing, Shea Gardner, Kevin McLoughlin, Nisha Mulakken, Michelle Alegria-Hartman, Phillip Banda, Peter Williams, Pauline Gu, Mark Wagner, Chitra Manohar, Tom Slezak

published 14 May 2008

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Analysis of the Human Kinome Using Methods Including Fold Recognition Reveals Two Novel Kinases

Kristine M. Briedis, Ayelet Starr, Philip E. Bourne

published 13 Feb 2008

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Admixture Mapping Provides Evidence of Association of the VNN1 Gene with Hypertension

Xiaofeng Zhu, Richard S. Cooper

published 28 Nov 2007

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ADaCGH: A Parallelized Web-Based Application and R Package for the Analysis of aCGH Data

Ramón Díaz-Uriarte, Oscar M. Rueda

published 15 Aug 2007

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