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Genotyping

Optimizing hierarchical tree dissection parameters using historic epidemiologic data as ‘ground truth’

David Jacobson, Joel Barratt

published 24 Feb 2023

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HIV virologic response, patterns of drug resistance mutations and correlates among adolescents and young adults: A cross-sectional study in Tanzania

Joan Rugemalila, Doreen Kamori, Peter Kunambi, Mucho Mizinduko, Amon Sabasaba, Salim Masoud, Frank Msafiri, Sabina Mugusi, Rita Mutagonda, Linda Mlunde, Davis Amani, Erick Mboya, Macdonald Mahiti, George Ruhago, Jeremiah Mushi, Veryeh Sambu, George Mgomella, Boniface Jullu, Werner Maokola, Prosper Njau, Beatrice Mutayoba, Godfrey Barabona, Takamasa Ueno, Andrea Pembe, Tumaini Nagu, Bruno Sunguya, Said Aboud

published 23 Feb 2023

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Decoding type 2 diabetes mellitus genetic risk variants in Pakistani Pashtun ethnic population using the nascent whole exome sequencing and MassARRAY genotyping: A case-control association study

Asif Jan, Zakiullah, Sajid Ali, Basir Muhammad, Amina Arshad, Yasar Shah, Haji Bahadur, Hamayun Khan, Fazli Khuda, Rani Akbar, Kiran Ijaz

published 27 Jan 2023

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Utility of a buccal swab point-of-care test for the IFNL4 genotype in the era of direct acting antivirals for hepatitis C virus

Aminata Sy, Leanne McCabe, Emma Hudson, Azim M. Ansari, Vincent Pedergnana, Shang-Kuan Lin, S. Santana, Marzia Fiorino, Aftab Ala, Ben Stone, M. Smith, Mark Nelson, Stephen T. Barclay, Stuart McPherson, Stephen D. Ryder, Jane Collier, Eleanor Barnes, Ann Sarah Walker, Sarah L. Pett, Graham Cooke, on behalf of the STOP-HCV-1 trial team

published 23 Jan 2023

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Multilocus genotyping of Giardia duodenalis in pre-weaned calves with diarrhea in the Republic of Korea

Yu-Jin Park, Hyung-Chul Cho, Dong-Hun Jang, Jinho Park, Kyoung-Seong Choi

published 13 Jan 2023

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Changes in genital Human Papillomavirus (HPV) prevalence among urban females a decade after the Malaysian HPV vaccination program

Su Pei Khoo, Nor Adriana Muhammad Ridzuan Tan, Reena Rajasuriar, Nazrila Hairizan Nasir, Patti Gravitt, Chiu Wan Ng, Yin Ling Woo

published 20 Dec 2022

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Spatial distribution and insecticide resistance profile of Aedes aegypti and Aedes albopictus in Douala, the most important city of Cameroon

Aurelie P. Yougang, Christophe R. Keumeni, Theodel A. Wilson-Bahun, Armel N. Tedjou, Flobert Njiokou, Charles Wondji, Basile Kamgang

published 13 Dec 2022

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Assessing effectiveness of many-objective evolutionary algorithms for selection of tag SNPs

Rashad Moqa, Irfan Younas, Maryam Bashir

published 08 Dec 2022

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Nanopore sequencing data analysis using Microsoft Azure cloud computing service

Linh Truong, Felipe Ayora, Lloyd D’Orsogna, Patricia Martinez, Dianne De Santis

published 02 Dec 2022

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Human papillomavirus genotyping using next generation sequencing (NGS) in cervical lesions: Genotypes by histologic grade and their relative proportion in multiple infections

Jorge Alejandro Basiletti, Joan Valls, Tomás Poklépovich, María Dolores Fellner, Maryluz Rol, Rafael Alonso, Rita Mariel Correa, María Celeste Colucci, Mercedes Rodríguez de la Peña, Paula Gabriela Falabella, Agustina Saíno, Josefina Campos, Rolando Herrero, Maribel Almonte, María Alejandra Picconi

published 23 Nov 2022

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Novel genotyping algorithms for rare variants significantly improve the accuracy of Applied Biosystems™ Axiom™ array genotyping calls: Retrospective evaluation of UK Biobank array data

Orna Mizrahi-Man, Marcos H. Woehrmann, Teresa A. Webster, Jeremy Gollub, Adrian Bivol, Sara M. Keeble, Katherine H. Aull, Anuradha Mittal, Alan H. Roter, Brant A. Wong, Jeanette P. Schmidt

published 17 Nov 2022

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Evaluating noninvasive methods for estimating cestode prevalence in a wild carnivore population

Ellen E. Brandell, Madeline K. Jackson, Paul C. Cross, Antoinette J. Piaggio, Daniel R. Taylor, Douglas W. Smith, Belgees Boufana, Daniel R. Stahler, Peter J. Hudson

published 15 Nov 2022

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Probabilistic mathematical modelling to predict the red cell phenotyped donor panel size

Denisse Best, Kevin Burrage, Pamela Burrage, Diane Donovan, Shamila Ginige, Tanya Powley, Bevan Thompson, James Daly

published 11 Nov 2022

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