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Genotyping

From chip to SNP: Rapid development and evaluation of a targeted capture genotyping-by-sequencing approach to support research and management of a plaguing rodent

Kevin P. Oh, Nikki Van de Weyer, Wendy A. Ruscoe, Steve Henry, Peter R. Brown

published 17 Aug 2023

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Development and application of a qPCR-based genotyping assay for Ophidiomyces ophidiicola to investigate the epidemiology of ophidiomycosis

Ellen Haynes, Jeffrey Lorch, Matthew C. Allender

published 03 Aug 2023

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Bioinformatics approach for developing a minimum set of SNP markers for identification of temperate japonica rice varieties cultivated in Spain

Ester Sales, Julia García-Romeral, Concha Domingo

published 23 Jun 2023

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Altered GC- and AT-biased genotypes of Ophiocordyceps sinensis in the stromal fertile portions and ascospores of natural Cordyceps sinensis

Yu-Ling Li, Ling Gao, Yi-Sang Yao, Xiu-Zhang Li, Zi-Mei Wu, Ning-Zhi Tan, Zhou-Qing Luo, Wei-Dong Xie, Jian-Yong Wu, Jia-Shi Zhu

published 08 Jun 2023

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Rapid genotyping of porcine reproductive and respiratory syndrome virus (PRRSV) using MinION nanopore sequencing

Leonardo Cardia Caserta, Jianqiang Zhang, Pablo Piñeyro, Diego G. Diel

published 23 May 2023

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A minisatellite-based MLVA for deciphering the global epidemiology of the bacterial cassava pathogen Xanthomonas phaseoli pv. manihotis

Leidy Rache, Laurence Blondin, Paula Diaz Tatis, Carolina Flores, Andrea Camargo, Moussa Kante, Issa Wonni, Camilo López, Boris Szurek, Stephane Dupas, Olivier Pruvost, Ralf Koebnik, Silvia Restrepo, Adriana Bernal, Christian Vernière

published 11 May 2023

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The 3’ UTR polymorphisms rs3742330 in DICER1 and rs10719 in DROSHA genes are not associated with primary open-angle and angle-closure glaucoma: As case-control study

Altaf A. Kondkar, Taif A. Azad, Tahira Sultan, Essam A. Osman, Faisal A. Almobarak, Glenn P. Lobo, Saleh A. Al-Obeidan

published 26 Apr 2023

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Identification of copy number variations in the genome of Dairy Gir cattle

Larissa G. Braga, Tatiane C. S. Chud, Rafael N. Watanabe, Rodrigo P. Savegnago, Thomaz M. Sena, Adriana S. do Carmo, Marco A. Machado, João Cláudio do C. Panetto, Marcos Vinicius G. B. da Silva, Danísio P. Munari

published 10 Apr 2023

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Integration of targeted sequencing and pseudo-tetraploid genotyping into clinically assisted decision support for β-thalassemia invasive prenatal diagnosis

Wenguang Jia, Jiying Shi, Hengying Zhu, Xiaojing Wu, Yayun Ling, Ping Chen

published 04 Apr 2023

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Comparing the salinity tolerance of twenty different wheat genotypes on the basis of their physiological and biochemical parameters under NaCl stress

Amaneh Ghasemi Masarmi, M Solouki, B Fakheri, Hazem M. Kalaji, N Mahgdingad, S Golkari, Arkadiusz Telesiński, Sobhi F. Lamlom, Henryk Kociel, Ahmed Fathy Yousef

published 31 Mar 2023

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Optimizing hierarchical tree dissection parameters using historic epidemiologic data as ‘ground truth’

David Jacobson, Joel Barratt

published 24 Feb 2023

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HIV virologic response, patterns of drug resistance mutations and correlates among adolescents and young adults: A cross-sectional study in Tanzania

Joan Rugemalila, Doreen Kamori, Peter Kunambi, Mucho Mizinduko, Amon Sabasaba, Salim Masoud, Frank Msafiri, Sabina Mugusi, Rita Mutagonda, Linda Mlunde, Davis Amani, Erick Mboya, Macdonald Mahiti, George Ruhago, Jeremiah Mushi, Veryeh Sambu, George Mgomella, Boniface Jullu, Werner Maokola, Prosper Njau, Beatrice Mutayoba, Godfrey Barabona, Takamasa Ueno, Andrea Pembe, Tumaini Nagu, Bruno Sunguya, Said Aboud

published 23 Feb 2023

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Decoding type 2 diabetes mellitus genetic risk variants in Pakistani Pashtun ethnic population using the nascent whole exome sequencing and MassARRAY genotyping: A case-control association study

Asif Jan, Zakiullah, Sajid Ali, Basir Muhammad, Amina Arshad, Yasar Shah, Haji Bahadur, Hamayun Khan, Fazli Khuda, Rani Akbar, Kiran Ijaz

published 27 Jan 2023

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