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Genotyping

Molecular phylogeny and distribution of dengue virus serotypes circulating in Nepal in 2017

Sabita Prajapati, Rajindra Napit, Anup Bastola, Ramanuj Rauniyar, Srijan Shrestha, Mahesh Lamsal, Anurag Adhikari, Parmananda Bhandari, Sanjay Ray Yadav, Krishna Das Manandhar

published 07 Jul 2020

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Allele combinations of maturity genes E1-E4 affect adaptation of soybean to diverse geographic regions and farming systems in China

Luping Liu, Wenwen Song, Liwei Wang, Xuegang Sun, Yanping Qi, Tingting Wu, Shi Sun, Bingjun Jiang, Cunxiang Wu, Wensheng Hou, Zhongfu Ni, Tianfu Han

published 06 Jul 2020

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Detection of hepatitis B virus pre-S mutants in plasma by a next-generation sequencing-based platform determines their patterns in liver tissues

Chiao-Fang Teng, Hung-Wen Tsai, Tsai-Chung Li, Ting Wang, John Wang, Woei-Cherng Shyu, Han-Chieh Wu, Ih-Jen Su, Long-Bin Jeng

published 19 Jun 2020

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RapidRat: Development, validation and application of a genotyping-by-sequencing panel for rapid biosecurity and invasive species management

Bryson M. F. Sjodin, Robyn L. Irvine, Michael A. Russello

published 18 Jun 2020

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Outcomes in oncogenic-addicted advanced NSCLC patients with actionable mutations identified by liquid biopsy genomic profiling using a tagged amplicon-based NGS assay

Jordi Remon, Aurelie Swalduz, David Planchard, Sandra Ortiz-Cuaran, Laura Mezquita, Ludovic Lacroix, Cecile Jovelet, Etienne Rouleau, Camille Leonce, Frank De Kievit, Clive Morris, Greg Jones, Kelly Mercier, Karen Howarth, Emma Green, Maurice Pérol, Pierre Saintigny, Benjamin Besse

published 11 Jun 2020

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Hypomorphic SI genetic variants are associated with childhood chronic loose stools

Bruno P. Chumpitazi, Jeffery Lewis, Derick Cooper, Mauro D’Amato, Joel Lim, Sandeep Gupta, Adrian Miranda, Natalie Terry, Devendra Mehta, Ann Scheimann, Molly O’Gorman, Neelesh Tipnis, Yinka Davies, Joel Friedlander, Heather Smith, Jaya Punati, Julie Khlevner, Mala Setty, Carlo Di Lorenzo

published 20 May 2020

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An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies

Karina Y. Morales, Namrata Singh, Francisco Agosto Perez, John Carlos Ignacio, Ranjita Thapa, Juan D. Arbelaez, Rodante E. Tabien, Adam Famoso, Diane R. Wang, Endang M. Septiningsih, Yuxin Shi, Tobias Kretzschmar, Susan R. McCouch, Michael J. Thomson

published 14 May 2020

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SNP markers for low molecular glutenin subunits (LMW-GSs) at the Glu-A3 and Glu-B3 loci in bread wheat

Susanne Dreisigacker, Yonggui Xiao, Deepmala Sehgal, Carlos Guzman, Zhonghu He, Xianchun Xia, Roberto J. Peña

published 12 May 2020

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Allelic variations of the Wx locus in cultivated rice and their use in the development of hybrid rice in China

Ye Shao, Yan Peng, Bigang Mao, Qiming Lv, Dingyang Yuan, Xionglun Liu, Bingran Zhao

published 05 May 2020

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Genotyping by multiplexed sequencing (GMS): A customizable platform for genomic selection

Travis M. Ruff, Elliott J. Marston, Jonathan D. Eagle, Sajal R. Sthapit, Marcus A. Hooker, Daniel Z. Skinner, Deven R. See

published 01 May 2020

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Development of diagnostic SNP markers for quality assurance and control in sweetpotato [Ipomoea batatas (L.) Lam.] breeding programs

Dorcus C. Gemenet, Mercy N. Kitavi, Maria David, Dorcah Ndege, Reuben T. Ssali, Jolien Swanckaert, Godwill Makunde, G. Craig Yencho, Wolfgang Gruneberg, Edward Carey, Robert O. Mwanga, Maria I. Andrade, Simon Heck, Hugo Campos

published 24 Apr 2020

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Full genome characterization of novel DS-1-like G9P[8] rotavirus strains that have emerged in Thailand

Saori Fukuda, Ratana Tacharoenmuang, Ratigorn Guntapong, Sompong Upachai, Phakapun Singchai, Tomihiko Ide, Riona Hatazawa, Karun Sutthiwarakom, Santip Kongjorn, Napa Onvimala, Kriangsak Ruchusatsawast, Pimpa Rungnopakun, Jutarat Mekmallika, Yoshiki Kawamura, Kazushi Motomura, Masashi Tatsumi, Naokazu Takeda, Takayuki Murata, Tetsushi Yoshikawa, Ballang Uppapong, Koki Taniguchi, Satoshi Komoto

published 22 Apr 2020

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BWGS: A R package for genomic selection and its application to a wheat breeding programme

Gilles Charmet, Louis-Gautier Tran, Jérôme Auzanneau, Renaud Rincent, Sophie Bouchet

published 02 Apr 2020

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