Genomic signal processing

A Non-Parametric Peak Calling Algorithm for DamID-Seq

Renhua Li, Leonie U. Hempel, Tingbo Jiang

published 18 Mar 2015

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Genome Wide Nucleosome Mapping for HSV-1 Shows Nucleosomes Are Deposited at Preferred Positions during Lytic Infection

Jaewook Oh, Iryna F. Sanders, Eric Z. Chen, Hongzhe Li, John W. Tobias, R. Benjamin Isett, Sindura Penubarthi, Hao Sun, Don A. Baldwin, Nigel W. Fraser

published 24 Feb 2015

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Distribution and Evolution of Repeated Sequences in Genomes of Triatominae (Hemiptera-Reduviidae) Inferred from Genomic In Situ Hybridization

Sebastian Pita, Francisco Panzera, Antonio Sánchez, Yanina Panzera, Teresa Palomeque, Pedro Lorite

published 05 Dec 2014

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Genomic Signal Processing Methods for Computation of Alignment-Free Distances from DNA Sequences

Ernesto Borrayo, E. Gerardo Mendizabal-Ruiz, Hugo Vélez-Pérez, Rebeca Romo-Vázquez, Adriana P. Mendizabal, J. Alejandro Morales

published 13 Nov 2014

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A Genome-Wide Association Study Identifies Potential Susceptibility Loci for Hirschsprung Disease

Jeong-Hyun Kim, Hyun Sub Cheong, Jae Hoon Sul, Jeong-Meen Seo, Dae-Yeon Kim, Jung-Tak Oh, Kwi-Won Park, Hyun-Young Kim, Soo-Min Jung, Kyuwhan Jung, Min Jeng Cho, Joon Seol Bae, Hyoung Doo Shin

published 13 Oct 2014

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New Types of Wheat Chromosomal Structural Variations in Derivatives of Wheat-Rye Hybrids

Zongxiang Tang, Meng Li, Lei Chen, Yangyang Wang, Zhenglong Ren, Shulan Fu

published 10 Oct 2014

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Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants

Liliana Greger, Jing Su, Johan Rung, Pedro G. Ferreira, Geuvadis consortium , Tuuli Lappalainen, Emmanouil T. Dermitzakis, Alvis Brazma

published 18 Aug 2014

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Genome-Wide Linkage Study Suggests a Susceptibility Locus for Isolated Bilateral Microtia on 4p15.32–4p16.2

Xin Li, Jintian Hu, Jiao Zhang, Qian Jin, Duen-Mei Wang, Jun Yu, Qingguo Zhang, Yong-Biao Zhang

published 01 Jul 2014

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Gene-Wide Analysis Detects Two New Susceptibility Genes for Alzheimer's Disease

Valentina Escott-Price, Céline Bellenguez, Li-San Wang, Seung-Hoan Choi, Denise Harold, Lesley Jones, Peter Holmans, Amy Gerrish, Alexey Vedernikov, Alexander Richards, Anita L. DeStefano, Jean-Charles Lambert, Carla A. Ibrahim-Verbaas, Adam C. Naj, Rebecca Sims, Gyungah Jun, Joshua C. Bis, Gary W. Beecham, Benjamin Grenier-Boley, Giancarlo Russo, Tricia A. Thornton-Wells, Nicola Denning, Albert V. Smith, Vincent Chouraki, Charlene Thomas, M. Arfan Ikram, Diana Zelenika, Badri N. Vardarajan, Yoichiro Kamatani, Chiao-Feng Lin, Helena Schmidt, Brian Kunkle, Melanie L. Dunstan, Maria Vronskaya, the United Kingdom Brain Expression Consortium , Andrew D. Johnson, Agustin Ruiz, Marie-Thérèse Bihoreau, Christiane Reitz, Florence Pasquier, Paul Hollingworth, Olivier Hanon, Annette L. Fitzpatrick, Joseph D. Buxbaum, Dominique Campion, Paul K. Crane, Clinton Baldwin, Tim Becker, Vilmundur Gudnason, Carlos Cruchaga, David Craig, Najaf Amin, Claudine Berr, Oscar L. Lopez, Philip L. De Jager, Vincent Deramecourt, Janet A. Johnston, Denis Evans, Simon Lovestone, Luc Letenneur, Isabel Hernández, David C. Rubinsztein, Gudny Eiriksdottir, Kristel Sleegers, Alison M. Goate, Nathalie Fiévet, Matthew J. Huentelman, Michael Gill, Kristelle Brown, M. Ilyas Kamboh, Lina Keller, Pascale Barberger-Gateau, Bernadette McGuinness, Eric B. Larson, Amanda J. Myers, Carole Dufouil, Stephen Todd, David Wallon, Seth Love, Ekaterina Rogaeva, John Gallacher, Peter St George-Hyslop, Jordi Clarimon, Alberto Lleo, Anthony Bayer, Debby W. Tsuang, Lei Yu, Magda Tsolaki, Paola Bossù, Gianfranco Spalletta, Petra Proitsi, John Collinge, Sandro Sorbi, Florentino Sanchez Garcia, Nick C. Fox, John Hardy, Maria Candida Deniz Naranjo, Paolo Bosco, Robert Clarke, Carol Brayne, Daniela Galimberti, Elio Scarpini, Ubaldo Bonuccelli, Michelangelo Mancuso, Gabriele Siciliano, Susanne Moebus, Patrizia Mecocci, Maria Del Zompo, Wolfgang Maier, Harald Hampel, Alberto Pilotto, Ana Frank-García, Francesco Panza, Vincenzo Solfrizzi, Paolo Caffarra, Benedetta Nacmias, William Perry, Manuel Mayhaus, Lars Lannfelt, Hakon Hakonarson, Sabrina Pichler, Minerva M. Carrasquillo, Martin Ingelsson, Duane Beekly, Victoria Alvarez, Fanggeng Zou, Otto Valladares, Steven G. Younkin, Eliecer Coto, Kara L. Hamilton-Nelson, Wei Gu, Cristina Razquin, Pau Pastor, Ignacio Mateo, Michael J. Owen, Kelley M. Faber, Palmi V. Jonsson, Onofre Combarros, Michael C. O'Donovan, Laura B. Cantwell, Hilkka Soininen, Deborah Blacker, Simon Mead, Thomas H. Mosley Jr, David A. Bennett, Tamara B. Harris, Laura Fratiglioni, Clive Holmes, Renee F. A. G. de Bruijn, Peter Passmore, Thomas J. Montine, Karolien Bettens, Jerome I. Rotter, Alexis Brice, Kevin Morgan, Tatiana M. Foroud, Walter A. Kukull, Didier Hannequin, John F. Powell, Michael A. Nalls, Karen Ritchie, Kathryn L. Lunetta, John S. K. Kauwe, Eric Boerwinkle, Matthias Riemenschneider, Mercè Boada, Mikko Hiltunen, Eden R. Martin, Reinhold Schmidt, Dan Rujescu, Jean-François Dartigues, Richard Mayeux, Christophe Tzourio, Albert Hofman, Markus M. Nöthen, Caroline Graff, Bruce M. Psaty, Jonathan L. Haines, Mark Lathrop, Margaret A. Pericak-Vance, Lenore J. Launer, Christine Van Broeckhoven, Lindsay A. Farrer, Cornelia M. van Duijn, Alfredo Ramirez, Sudha Seshadri, Gerard D. Schellenberg, Philippe Amouyel, Julie Williams

published 12 Jun 2014

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Integrative Analysis of Transcriptional Regulatory Network and Copy Number Variation in Intrahepatic Cholangiocarcinoma

Ling Li, Baofeng Lian, Chao Li, Wei Li, Jing Li, Yuannv Zhang, Xianghuo He, Yixue Li, Lu Xie

published 04 Jun 2014

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Rif1 Regulates Initiation Timing of Late Replication Origins throughout the S. cerevisiae Genome

Jared M. Peace, Anna Ter-Zakarian, Oscar M. Aparicio

published 30 May 2014

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Genome-Wide Analysis of Cold Adaptation in Indigenous Siberian Populations

Alexia Cardona, Luca Pagani, Tiago Antao, Daniel J. Lawson, Christina A. Eichstaedt, Bryndis Yngvadottir, Ma Than Than Shwe, Joseph Wee, Irene Gallego Romero, Srilakshmi Raj, Mait Metspalu, Richard Villems, Eske Willerslev, Chris Tyler-Smith, Boris A. Malyarchuk, Miroslava V. Derenko, Toomas Kivisild

published 21 May 2014

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Enhancing Genome-Enabled Prediction by Bagging Genomic BLUP

Daniel Gianola, Kent A. Weigel, Nicole Krämer, Alessandra Stella, Chris-Carolin Schön

published 10 Apr 2014

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Genomic signal processing

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