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Genomic signal processing

Accurate and Robust Prediction of Genetic Relationship from Whole-Genome Sequences

Hong Li, Gustavo Glusman, [ ... ], Jared C. Roach

Validation of a Commercial Insulated Isothermal PCR-based POCKIT Test for Rapid and Easy Detection of White Spot Syndrome Virus Infection in Litopenaeus vannamei

Yun-Long Tsai, Han-Ching Wang, [ ... ], Pei-Yu Lee

CATCHprofiles: Clustering and Alignment Tool for ChIP Profiles

Fiona G. G. Nielsen, Kasper Galschiøt Markus, [ ... ], Martijn Huynen

Prediction of Poly(A) Sites by Poly(A) Read Mapping

Thomas Bonfert, Caroline C. Friedel

Combinations of Histone Modifications Mark Exon Inclusion Levels

Stefan Enroth, Susanne Bornelöv, Claes Wadelius, Jan Komorowski

Evidence for Site-Specific Occupancy of the Mitochondrial Genome by Nuclear Transcription Factors

Georgi K. Marinov, Yun E. Wang, David Chan, Barbara J. Wold

Analysis of Antisense Expression by Whole Genome Tiling Microarrays and siRNAs Suggests Mis-Annotation of Arabidopsis Orphan Protein-Coding Genes

Casey R. Richardson, Qing-Jun Luo, [ ... ], Christopher D. Rock

Bidirectional Promoters as Important Drivers for the Emergence of Species-Specific Transcripts

Valer Gotea, Hanna M. Petrykowska, Laura Elnitski

Rif1 Regulates Initiation Timing of Late Replication Origins throughout the S. cerevisiae Genome

Jared M. Peace, Anna Ter-Zakarian, Oscar M. Aparicio

Genome-Scale Identification Method Applied to Find Cryptic Aminoglycoside Resistance Genes in Pseudomonas aeruginosa

Julie M. Struble, Ryan T. Gill

A genome-wide scan for diversifying selection signatures in selected horse breeds

Artur Gurgul, Igor Jasielczuk, [ ... ], Monika Bugno-Poniewierska

Systematic Spatial Bias in DNA Microarray Hybridization Is Caused by Probe Spot Position-Dependent Variability in Lateral Diffusion

Doris Steger, David Berry, [ ... ], Alexander Loy

Custom Design and Analysis of High-Density Oligonucleotide Bacterial Tiling Microarrays

Gard O. S. Thomassen, Alexander D. Rowe, [ ... ], Torbjørn Rognes

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