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Genomic signal processing

Deletion of Mediator 1 suppresses TGFβ signaling leading to changes in epidermal lineages and regeneration

Yuko Oda, Thai Nguyen, [ ... ], Daniel D. Bikle

Observations of linear aggregation behavior in rotifers (Brachionus calyciflorus)

Shuang-Huai Cheng, Hai-Ying Zhang, [ ... ], Chuan-Zhu Lv

Sequence characteristics define trade-offs between on-target and genome-wide off-target hybridization of oligoprobes

Olga V. Matveeva, Aleksey Y. Ogurtsov, Nafisa N. Nazipova, Svetlana A. Shabalina

Signal-based optical map alignment

Mehmet Akdel, Henri van de Geest, [ ... ], Dick de Ridder

TAFFYS: An Integrated Tool for Comprehensive Analysis of Genomic Aberrations in Tumor Samples

Yuanning Liu, Ao Li, Huanqing Feng, Minghui Wang

GenomeBits insight into omicron and delta variants of coronavirus pathogen

Enrique Canessa, Livio Tenze

Clustering-local-unique-enriched-signals (CLUES) promotes identification of novel regulators of ES cell self-renewal and pluripotency

Chao Wu, Yang Jiao, [ ... ], Junling Jia

Cytogenetic evidence supports Avena insularis being closely related to hexaploid oats

Araceli Fominaya, Yolanda Loarce, Juan M. González, Esther Ferrer

Development of a Physical Model-Based Algorithm for the Detection of Single-Nucleotide Substitutions by Using Tiling Microarrays

Naoaki Ono, Shingo Suzuki, [ ... ], Tetsuya Yomo

An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing

James Robertson, Catherine Yoshida, [ ... ], John H. E. Nash

ARID1A loss is associated with increased NRF2 signaling in human head and neck squamous cell carcinomas

Vinh Nguyen, Travis P. Schrank, Michael B. Major, Bernard E. Weissman

A novel dual probe-based method for mutation detection using isothermal amplification

Nidhi Nandu, Michael Miller, Yanhong Tong, Zhi-xiang Lu

OpDetect: A convolutional and recurrent neural network classifier for precise and sensitive operon detection from RNA-seq data

Rezvan Karaji, Lourdes Peña-Castillo

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