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Genome sequencing

Evaluation of high molecular weight DNA extraction methods for long-read sequencing of Shiga toxin-producing Escherichia coli

Sandra Jaudou, Mai-Lan Tran, [ ... ], Sabine Delannoy

Genotype imputation and polygenic score estimation in northwestern Russian population

Nikita Kolosov, Valeriia Rezapova, [ ... ], Mykyta Artomov

Evaluation of a commercial SARS-CoV-2 multiplex PCR genotyping assay for variant identification in resource-scarce settings

Chijioke N. Umunnakwe, Zinhle N. Makatini, [ ... ], Hugo A. Tempelman

MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

Jidong Lang

Comparison of different sequencing techniques for identification of SARS-CoV-2 variants of concern with multiplex real-time PCR

Diyanath Ranasinghe, Tibutius Thanesh Pramanayagam Jayadas, [ ... ], Gathsaurie Neelika Malavige

Spontaneous rate of clonal single nucleotide mutations in Daphnia galeata

Markus Pfenninger, Halina Binde Doria, [ ... ], Mathilde Cordellier

A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.)

Jahn Davik, Dag Røen, [ ... ], Daniel James Sargent

Implementation of a COVID-19 Genomic Surveillance Regional Network for Latin America and Caribbean region

Juliana Almeida Leite, Andrea Vicari, [ ... ], Jairo Mendez-Rico

Sequencing SARS-CoV-2 from antigen tests

Ashley Nazario-Toole, Holly M. Nguyen, [ ... ], Thomas F. Gibbons

Characterization of the chloroplast genome of Lonicera ruprechtiana Regel and comparison with other selected species of Caprifoliaceae

Lei Gu, Yunyan Hou, [ ... ], Qingbei Weng

Evolutionary paths to macrolide resistance in a Neisseria commensal converge on ribosomal genes through short sequence duplications

Jordan C. Raisman, Michael A. Fiore, [ ... ], Crista B. Wadsworth

A short plus long-amplicon based sequencing approach improves genomic coverage and variant detection in the SARS-CoV-2 genome

Carlos Arana, Chaoying Liang, [ ... ], Prithvi Raj

Detection of MDM2 amplification by shallow whole genome sequencing of cell-free DNA of patients with dedifferentiated liposarcoma

Joanna Przybyl, Lien Spans, [ ... ], Matt van de Rijn

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