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Genome sequencing

The Feasibility of Using High Resolution Genome Sequencing of Influenza A Viruses to Detect Mixed Infections and Quasispecies

Muthannan A. Ramakrishnan, Zheng Jin Tu, Sushmita Singh, Ashok K. Chockalingam, Marie R. Gramer, Ping Wang, Sagar M. Goyal, My Yang, David A. Halvorson, Srinand Sreevatsan

published 22 Sep 2009

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Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

Sébastien Rodrigue, Rex R. Malmstrom, Aaron M. Berlin, Bruce W. Birren, Matthew R. Henn, Sallie W. Chisholm

published 02 Sep 2009

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Detection of Genomic Variation by Selection of a 9 Mb DNA Region and High Throughput Sequencing

Sergey I. Nikolaev, Christian Iseli, Andrew J. Sharp, Daniel Robyr, Jacques Rougemont, Corinne Gehrig, Laurent Farinelli, Stylianos E. Antonarakis

published 17 Aug 2009

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Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology

Antonio M. Ramos, Richard P. M. A. Crooijmans, Nabeel A. Affara, Andreia J. Amaral, Alan L. Archibald, Jonathan E. Beever, Christian Bendixen, Carol Churcher, Richard Clark, Patrick Dehais, Mark S. Hansen, Jakob Hedegaard, Zhi-Liang Hu, Hindrik H. Kerstens, Andy S. Law, Hendrik-Jan Megens, Denis Milan, Danny J. Nonneman, Gary A. Rohrer, Max F. Rothschild, Tim P. L. Smith, Robert D. Schnabel, Curt P. Van Tassell, Jeremy F. Taylor, Ralph T. Wiedmann, Lawrence B. Schook, Martien A. M. Groenen

published 05 Aug 2009

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A Flood of Microbial Genomes–Do We Need More?

Niyaz Ahmed

published 09 Jun 2009

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Genome-Wide Massively Parallel Sequencing of Formaldehyde Fixed-Paraffin Embedded (FFPE) Tumor Tissues for Copy-Number- and Mutation-Analysis

Michal R. Schweiger, Martin Kerick, Bernd Timmermann, Marcus W. Albrecht, Tatjana Borodina, Dmitri Parkhomchuk, Kurt Zatloukal, Hans Lehrach

published 14 May 2009

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New Population and Phylogenetic Features of the Internal Variation within Mitochondrial DNA Macro-Haplogroup R0

Vanesa Álvarez-Iglesias, Ana Mosquera-Miguel, Maria Cerezo, Beatriz Quintáns, Maria Teresa Zarrabeitia, Ivon Cuscó, Maria Victoria Lareu, Óscar García, Luis Pérez-Jurado, Ángel Carracedo, Antonio Salas

published 02 Apr 2009

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Relation of DNA Methylation of 5′-CpG Island of ACSL3 to Transplacental Exposure to Airborne Polycyclic Aromatic Hydrocarbons and Childhood Asthma

Frederica Perera, Wan-yee Tang, Julie Herbstman, Deliang Tang, Linda Levin, Rachel Miller, Shuk-mei Ho

published 16 Feb 2009

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Comparing Platforms for C. elegans Mutant Identification Using High-Throughput Whole-Genome Sequencing

Yufeng Shen, Sumeet Sarin, Ye Liu, Oliver Hobert, Itsik Pe'er

published 24 Dec 2008

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Genome-Scale Validation of Deep-Sequencing Libraries

Dominic Schmidt, Rory Stark, Michael D. Wilson, Gordon D. Brown, Duncan T. Odom

published 12 Nov 2008

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Re-Assembly of the Genome of Francisella tularensis Subsp. holarctica OSU18

Daniela Puiu, Steven L. Salzberg

published 17 Oct 2008

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Distilling Artificial Recombinants from Large Sets of Complete mtDNA Genomes

Qing-Peng Kong, Antonio Salas, Chang Sun, Noriyuki Fuku, Masashi Tanaka, Li Zhong, Cheng-Ye Wang, Yong-Gang Yao, Hans-Jürgen Bandelt

published 20 Aug 2008

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An Optimized Chloroplast DNA Extraction Protocol for Grasses (Poaceae) Proves Suitable for Whole Plastid Genome Sequencing and SNP Detection

Kerstin Diekmann, Trevor R. Hodkinson, Evelyn Fricke, Susanne Barth

published 30 Jul 2008

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