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Genome sequencing

Use of Low-Coverage, Large-Insert, Short-Read Data for Rapid and Accurate Generation of Enhanced-Quality Draft Pseudomonas Genome Sequences

Heath E. O'Brien, Yunchen Gong, [ ... ], David S. Guttman

An Evaluation of Different Target Enrichment Methods in Pooled Sequencing Designs for Complex Disease Association Studies

Aaron G. Day-Williams, Kirsten McLay, [ ... ], Eleftheria Zeggini

ConDeTri - A Content Dependent Read Trimmer for Illumina Data

Linnéa Smeds, Axel Künstner

Whole Genome Sequencing and Evolutionary Analysis of Human Respiratory Syncytial Virus A and B from Milwaukee, WI 1998-2010

Cecilia Rebuffo-Scheer, Michael Bose, [ ... ], Kelly J. Henrickson

Rapid Genotyping of Soybean Cultivars Using High Throughput Sequencing

Kranthi Varala, Kankshita Swaminathan, Ying Li, Matthew E. Hudson

Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

Niina Haiminen, David N. Kuhn, Laxmi Parida, Isidore Rigoutsos

LOCAS – A Low Coverage Assembly Tool for Resequencing Projects

Juliane D. Klein, Stephan Ossowski, [ ... ], Daniel H. Huson

Design Considerations for Massively Parallel Sequencing Studies of Complex Human Disease

Bing-Jian Feng, Sean V. Tavtigian, Melissa C. Southey, David E. Goldgar

Structural Alterations from Multiple Displacement Amplification of a Human Genome Revealed by Mate-Pair Sequencing

Xiang Jiao, Magnus Rosenlund, [ ... ], Tobias Sjöblom

Exploring the Zoonotic Potential of Mycobacterium avium Subspecies paratuberculosis through Comparative Genomics

James W. Wynne, Tim J. Bull, [ ... ], Wojtek P. Michalski

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology

Alexander Mellmann, Dag Harmsen, [ ... ], Helge Karch

An Effective Method to Purify Plasmodium falciparum DNA Directly from Clinical Blood Samples for Whole Genome High-Throughput Sequencing

Sarah Auburn, Susana Campino, [ ... ], Dominic P. Kwiatkowski

Exome Sequencing Reveals Comprehensive Genomic Alterations across Eight Cancer Cell Lines

Han Chang, Donald G. Jackson, [ ... ], Nathan O. Siemers

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