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Genome sequencing

Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads

Li C. Xia, Jacob A. Cram, Ting Chen, Jed A. Fuhrman, Fengzhu Sun

published 06 Dec 2011

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Genome-Wide Mapping of Copy Number Variation in Humans: Comparative Analysis of High Resolution Array Platforms

Rajini R. Haraksingh, Alexej Abyzov, Mark Gerstein, Alexander E. Urban, Michael Snyder

published 30 Nov 2011

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Specific Capture and Whole-Genome Sequencing of Viruses from Clinical Samples

Daniel P. Depledge, Anne L. Palser, Simon J. Watson, Imogen Yi-Chun Lai, Eleanor R. Gray, Paul Grant, Ravinder K. Kanda, Emily Leproust, Paul Kellam, Judith Breuer

published 18 Nov 2011

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Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia

Jiří Macas, Eduard Kejnovský, Pavel Neumann, Petr Novák, Andrea Koblížková, Boris Vyskot

published 09 Nov 2011

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Use of Low-Coverage, Large-Insert, Short-Read Data for Rapid and Accurate Generation of Enhanced-Quality Draft Pseudomonas Genome Sequences

Heath E. O'Brien, Yunchen Gong, Pauline Fung, Pauline W. Wang, David S. Guttman

published 02 Nov 2011

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An Evaluation of Different Target Enrichment Methods in Pooled Sequencing Designs for Complex Disease Association Studies

Aaron G. Day-Williams, Kirsten McLay, Eleanor Drury, Sarah Edkins, Alison J. Coffey, Aarno Palotie, Eleftheria Zeggini

published 01 Nov 2011

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ConDeTri - A Content Dependent Read Trimmer for Illumina Data

Linnéa Smeds, Axel Künstner

published 19 Oct 2011

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Whole Genome Sequencing and Evolutionary Analysis of Human Respiratory Syncytial Virus A and B from Milwaukee, WI 1998-2010

Cecilia Rebuffo-Scheer, Michael Bose, Jie He, Shamim Khaja, Michael Ulatowski, Eric T. Beck, Jiang Fan, Swati Kumar, Martha I. Nelson, Kelly J. Henrickson

published 06 Oct 2011

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Rapid Genotyping of Soybean Cultivars Using High Throughput Sequencing

Kranthi Varala, Kankshita Swaminathan, Ying Li, Matthew E. Hudson

published 20 Sep 2011

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Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

Niina Haiminen, David N. Kuhn, Laxmi Parida, Isidore Rigoutsos

published 07 Sep 2011

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LOCAS – A Low Coverage Assembly Tool for Resequencing Projects

Juliane D. Klein, Stephan Ossowski, Korbinian Schneeberger, Detlef Weigel, Daniel H. Huson

published 15 Aug 2011

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Design Considerations for Massively Parallel Sequencing Studies of Complex Human Disease

Bing-Jian Feng, Sean V. Tavtigian, Melissa C. Southey, David E. Goldgar

published 05 Aug 2011

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Structural Alterations from Multiple Displacement Amplification of a Human Genome Revealed by Mate-Pair Sequencing

Xiang Jiao, Magnus Rosenlund, Sean D. Hooper, Christian Tellgren-Roth, Liqun He, Yutao Fu, Jonathan Mangion, Tobias Sjöblom

published 22 Jul 2011

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