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Genome sequencing

Prenatal Detection of Aneuploidy and Imbalanced Chromosomal Arrangements by Massively Parallel Sequencing

Shan Dan, Fang Chen, Kwong Wai Choy, Fuman Jiang, Jingrong Lin, Zhaoling Xuan, Wei Wang, Shengpei Chen, Xuchao Li, Hui Jiang, Tak Yeung Leung, Tze Kin Lau, Yue Su, Weiyuan Zhang, Xiuqing Zhang

published 28 Feb 2012

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Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data

Daniel R. Mende, Alison S. Waller, Shinichi Sunagawa, Aino I. Järvelin, Michelle M. Chan, Manimozhiyan Arumugam, Jeroen Raes, Peer Bork

published 23 Feb 2012

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Identification of Genome-Wide Variations among Three Elite Restorer Lines for Hybrid-Rice

Shuangcheng Li, Shiquan Wang, Qiming Deng, Aiping Zheng, Jun Zhu, Huainian Liu, Lingxia Wang, Fengyan Gao, Ting Zou, Bin Huang, Xuemei Cao, Lizhi Xu, Chuang Yu, Peng Ai, Ping Li

published 23 Feb 2012

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An Improved Chloroplast DNA Extraction Procedure for Whole Plastid Genome Sequencing

Chao Shi, Na Hu, Hui Huang, Ju Gao, You-Jie Zhao, Li-Zhi Gao

published 22 Feb 2012

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Rapid Microsatellite Identification from Illumina Paired-End Genomic Sequencing in Two Birds and a Snake

Todd A. Castoe, Alexander W. Poole, A. P. Jason de Koning, Kenneth L. Jones, Diana F. Tomback, Sara J. Oyler-McCance, Jennifer A. Fike, Stacey L. Lance, Jeffrey W. Streicher, Eric N. Smith, David D. Pollock

published 14 Feb 2012

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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample

Chengwei Luo, Despina Tsementzi, Nikos Kyrpides, Timothy Read, Konstantinos T. Konstantinidis

published 10 Feb 2012

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Fast Computation and Applications of Genome Mappability

Thomas Derrien, Jordi Estellé, Santiago Marco Sola, David G. Knowles, Emanuele Raineri, Roderic Guigó, Paolo Ribeca

published 19 Jan 2012

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Rapid Sequencing of the Bamboo Mitochondrial Genome Using Illumina Technology and Parallel Episodic Evolution of Organelle Genomes in Grasses

Peng-Fei Ma, Zhen-Hua Guo, De-Zhu Li

published 17 Jan 2012

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Minimal Absent Words in Four Human Genome Assemblies

Sara P. Garcia, Armando J. Pinho

published 29 Dec 2011

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Plantagora: Modeling Whole Genome Sequencing and Assembly of Plant Genomes

Roger Barthelson, Adam J. McFarlin, Steven D. Rounsley, Sarah Young

published 12 Dec 2011

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Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads

Li C. Xia, Jacob A. Cram, Ting Chen, Jed A. Fuhrman, Fengzhu Sun

published 06 Dec 2011

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Genome-Wide Mapping of Copy Number Variation in Humans: Comparative Analysis of High Resolution Array Platforms

Rajini R. Haraksingh, Alexej Abyzov, Mark Gerstein, Alexander E. Urban, Michael Snyder

published 30 Nov 2011

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Specific Capture and Whole-Genome Sequencing of Viruses from Clinical Samples

Daniel P. Depledge, Anne L. Palser, Simon J. Watson, Imogen Yi-Chun Lai, Eleanor R. Gray, Paul Grant, Ravinder K. Kanda, Emily Leproust, Paul Kellam, Judith Breuer

published 18 Nov 2011

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