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Genome sequencing

Use of Whole Genome Sequencing to Determine the Microevolution of Mycobacterium tuberculosis during an Outbreak

Midori Kato-Maeda, Christine Ho, [ ... ], Philip C. Hopewell

SOLiD™ Sequencing of Genomes of Clinical Isolates of Leishmania donovani from India Confirm Leptomonas Co-Infection and Raise Some Key Questions

Neeloo Singh, Surendra Chikara, Shyam Sundar

Exploring the Diversity of Arcobacter butzleri from Cattle in the UK Using MLST and Whole Genome Sequencing

J. Yvette Merga, Nicola J. Williams, [ ... ], Craig Winstanley

Comparison of Sequencing Platforms for Single Nucleotide Variant Calls in a Human Sample

Aakrosh Ratan, Webb Miller, [ ... ], Stephan C. Schuster

MRSA Transmission on a Neonatal Intensive Care Unit: Epidemiological and Genome-Based Phylogenetic Analyses

Ulrich Nübel, Matthias Nachtnebel, [ ... ], Tim Eckmanns

A Single Cell Level Based Method for Copy Number Variation Analysis by Low Coverage Massively Parallel Sequencing

Chunlei Zhang, Chunsheng Zhang, [ ... ], Wei Wang

Effective Preparation of Plasmodium vivax Field Isolates for High-Throughput Whole Genome Sequencing

Sarah Auburn, Jutta Marfurt, [ ... ], Ric N. Price

Significance of the Identification in the Horn of Africa of an Exceptionally Deep Branching Mycobacterium tuberculosis Clade

Yann Blouin, Yolande Hauck, [ ... ], Gilles Vergnaud

Semi-Automatic In Silico Gap Closure Enabled De Novo Assembly of Two Dehalobacter Genomes from Metagenomic Data

Shuiquan Tang, Yunchen Gong, Elizabeth A. Edwards

HTS-PEG: A Method for High Throughput Sequencing of the Paired-Ends of Genomic Libraries

Sisi Zhou, Yonggui Fu, [ ... ], Anlong Xu

FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads

Haibin Xu, Xiang Luo, [ ... ], Shilin Chen

Estimation of Copy Number Alterations from Exome Sequencing Data

Rafael Valdés-Mas, Silvia Bea, [ ... ], Xose S. Puente

Conveniently Pre-Tagged and Pre-Packaged: Extended Molecular Identification and Metagenomics Using Complete Metazoan Mitochondrial Genomes

Agnes Dettai, Cyril Gallut, [ ... ], Régis Debruyne

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