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Genome sequencing

High-molecular weight DNA extraction, clean-up and size selection for long-read sequencing

Ashley Jones, Cynthia Torkel, [ ... ], Benjamin Schwessinger

VirusFinder: Software for Efficient and Accurate Detection of Viruses and Their Integration Sites in Host Genomes through Next Generation Sequencing Data

Qingguo Wang, Peilin Jia, Zhongming Zhao

Fixing Formalin: A Method to Recover Genomic-Scale DNA Sequence Data from Formalin-Fixed Museum Specimens Using High-Throughput Sequencing

Sarah M. Hykin, Ke Bi, Jimmy A. McGuire

Comparison of whole genome amplification techniques for human single cell exome sequencing

Erik Borgström, Marta Paterlini, [ ... ], Joakim Lundeberg

Identification of Optimum Sequencing Depth Especially for De Novo Genome Assembly of Small Genomes Using Next Generation Sequencing Data

Aarti Desai, Veer Singh Marwah, [ ... ], Abhay Jere

Specific Capture and Whole-Genome Sequencing of Viruses from Clinical Samples

Daniel P. Depledge, Anne L. Palser, [ ... ], Judith Breuer

Single Virus Genomics: A New Tool for Virus Discovery

Lisa Zeigler Allen, Thomas Ishoey, [ ... ], Shannon J. Williamson

Abundant Human DNA Contamination Identified in Non-Primate Genome Databases

Mark S. Longo, Michael J. O'Neill, Rachel J. O'Neill

Application of Genotyping-by-Sequencing on Semiconductor Sequencing Platforms: A Comparison of Genetic and Reference-Based Marker Ordering in Barley

Martin Mascher, Shuangye Wu, [ ... ], Jesse Poland

An Optimized Chloroplast DNA Extraction Protocol for Grasses (Poaceae) Proves Suitable for Whole Plastid Genome Sequencing and SNP Detection

Kerstin Diekmann, Trevor R. Hodkinson, Evelyn Fricke, Susanne Barth

Improving PacBio Long Read Accuracy by Short Read Alignment

Kin Fai Au, Jason G. Underwood, Lawrence Lee, Wing Hung Wong

Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling

Felix Krueger, Simon R. Andrews, Cameron S. Osborne

Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads

Li C. Xia, Jacob A. Cram, [ ... ], Fengzhu Sun

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