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Genome sequencing

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

Brant K. Peterson, Jesse N. Weber, [ ... ], Hopi E. Hoekstra

Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample

Chengwei Luo, Despina Tsementzi, [ ... ], Konstantinos T. Konstantinidis

A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, [ ... ], Bairong Shen

Mind the Gap: Upgrading Genomes with Pacific Biosciences RS Long-Read Sequencing Technology

Adam C. English, Stephen Richards, [ ... ], Richard A. Gibbs

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology

Alexander Mellmann, Dag Harmsen, [ ... ], Helge Karch

Prenatal Detection of Aneuploidy and Imbalanced Chromosomal Arrangements by Massively Parallel Sequencing

Shan Dan, Fang Chen, [ ... ], Xiuqing Zhang

The Susceptibility of Pseudomonas aeruginosa Strains from Cystic Fibrosis Patients to Bacteriophages

Christiane Essoh, Yann Blouin, [ ... ], Christine Pourcel

Fast Computation and Applications of Genome Mappability

Thomas Derrien, Jordi Estellé, [ ... ], Paolo Ribeca

An Integrated Pipeline for de Novo Assembly of Microbial Genomes

Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling

Inexpensive Multiplexed Library Preparation for Megabase-Sized Genomes

Michael Baym, Sergey Kryazhimskiy, [ ... ], Roy Kishony

A Microfluidic Device for Preparing Next Generation DNA Sequencing Libraries and for Automating Other Laboratory Protocols That Require One or More Column Chromatography Steps

Swee Jin Tan, Huan Phan, [ ... ], William F. Burkholder

An Improved Chloroplast DNA Extraction Procedure for Whole Plastid Genome Sequencing

Chao Shi, Na Hu, [ ... ], Li-Zhi Gao

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

Robert Kofler, Pablo Orozco-terWengel, [ ... ], Christian Schlötterer

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