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Gene ontology annotations

Construction and application of SARS-CoV-2 protein ontology (CoVPO)

Aaron Nkhata, Xiaona Shi, Yongjuan Zhang, Heng Chen

published 12 May 2025

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De novo transcriptome analysis of halotolerant bacterium Staphylococcus sp. strain P-TSB-70 isolated from East coast of India: In search of salt stress tolerant genes

Priyanka Das, Bijay Kumar Behera, Soumendranath Chatterjee, Basanta Kumar Das, Trilochan Mohapatra

published 10 Feb 2020

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Cross-species multiple environmental stress responses: An integrated approach to identify candidate genes for multiple stress tolerance in sorghum (Sorghum bicolor (L.) Moench) and related model species

Adugna Abdi Woldesemayat, David M. Modise, Junaid Gemeildien, Bongani K. Ndimba, Alan Christoffels

published 28 Mar 2018

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Prioritizing Clinically Relevant Copy Number Variation from Genetic Interactions and Gene Function Data

Justin Foong, Marta Girdea, James Stavropoulos, Michael Brudno

published 05 Oct 2015

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Consensus Comparative Analysis of Human Embryonic Stem Cell-Derived Cardiomyocytes

Shaohong Zhang, Ellen Poon, Dongqing Xie, Kenneth R. Boheler, Ronald A. Li, Hau-San Wong

published 04 May 2015

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Toll-Like Receptor Signaling in Vertebrates: Testing the Integration of Protein, Complex, and Pathway Data in the Protein Ontology Framework

Cecilia Arighi, Veronica Shamovsky, Anna Maria Masci, Alan Ruttenberg, Barry Smith, Darren A. Natale, Cathy Wu, Peter D’Eustachio

published 20 Apr 2015

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Construction of an Ortholog Database Using the Semantic Web Technology for Integrative Analysis of Genomic Data

Hirokazu Chiba, Hiroyo Nishide, Ikuo Uchiyama

published 13 Apr 2015

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Knowledge Retrieval from PubMed Abstracts and Electronic Medical Records with the Multiple Sclerosis Ontology

Ashutosh Malhotra, Michaela Gündel, Abdul Mateen Rajput, Heinz-Theodor Mevissen, Albert Saiz, Xavier Pastor, Raimundo Lozano-Rubi, Elena H. Martinez-Lapsicina, Irati Zubizarreta, Bernd Mueller, Ekaterina Kotelnikova, Luca Toldo, Martin Hofmann-Apitius, Pablo Villoslada

published 09 Feb 2015

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Information Content-Based Gene Ontology Functional Similarity Measures: Which One to Use for a Given Biological Data Type?

Gaston K. Mazandu, Nicola J. Mulder

published 04 Dec 2014

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Representing Kidney Development Using the Gene Ontology

Yasmin Alam-Faruque, David P. Hill, Emily C. Dimmer, Midori A. Harris, Rebecca E. Foulger, Susan Tweedie, Helen Attrill, Douglas G. Howe, Stephen Randall Thomas, Duncan Davidson, Adrian S. Woolf, Judith A. Blake, Christopher J. Mungall, Claire O’Donovan, Rolf Apweiler, Rachael P. Huntley

published 18 Jun 2014

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CELLO2GO: A Web Server for Protein subCELlular LOcalization Prediction with Functional Gene Ontology Annotation

Chin-Sheng Yu, Chih-Wen Cheng, Wen-Chi Su, Kuei-Chung Chang, Shao-Wei Huang, Jenn-Kang Hwang, Chih-Hao Lu

published 09 Jun 2014

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Transcriptional Changes in Canine Distemper Virus-Induced Demyelinating Leukoencephalitis Favor a Biphasic Mode of Demyelination

Reiner Ulrich, Christina Puff, Konstantin Wewetzer, Arno Kalkuhl, Ulrich Deschl, Wolfgang Baumgärtner

published 22 Apr 2014

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Functional Abstraction as a Method to Discover Knowledge in Gene Ontologies

Alfred Ultsch, Jörn Lötsch

published 25 Feb 2014

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