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Functional genomics

Re-Annotation Is an Essential Step in Systems Biology Modeling of Functional Genomics Data

Bart H. J. van den Berg, Fiona M. McCarthy, Susan J. Lamont, Shane C. Burgess

published 14 May 2010

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Antigen Diversity in the Parasitic Bacterium Anaplasma phagocytophilum Arises from Selectively-Represented, Spatially Clustered Functional Pseudogenes

Janet E. Foley, Nathan C. Nieto, Anthony Barbet, Patrick Foley

published 15 Dec 2009

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Complete Genome Sequence of Francisella tularensis Subspecies holarctica FTNF002-00

Ravi D. Barabote, Gary Xie, Thomas S. Brettin, Steven H. Hinrichs, Paul D. Fey, Justin J. Jay, Jennifer L. Engle, Shubhada D. Godbole, Jyothi M. Noronha, Richard H. Scheuermann, Liwei W. Zhou, Christine Lion, Michael P. Dempsey

published 16 Sep 2009

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Analysis of Functional Genomic Signals Using the XOR Gate

Mahesh Yaragatti, Qi Wen

published 19 May 2009

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Compositional Genome Contexts Affect Gene Expression Control in Sea Urchin Embryo

Abdullah Al Mahmud, Gabriele Amore, Giorgio Bernardi

published 29 Dec 2008

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Modeling the Fitness Consequences of a Cyanophage-Encoded Photosynthesis Gene

Jason G. Bragg, Sallie W. Chisholm

published 29 Oct 2008

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Orthologous MicroRNA Genes Are Located in Cancer-Associated Genomic Regions in Human and Mouse

Igor V. Makunin, Michael Pheasant, Cas Simons, John S. Mattick

published 07 Nov 2007

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Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes

Feng Chen, Aaron J. Mackey, Jeroen K. Vermunt, David S. Roos

published 18 Apr 2007

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