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Functional genomics

Mitochondrial Genomes of Two Barklice, Psococerastis albimaculata and Longivalvus hyalospilus (Psocoptera: Psocomorpha): Contrasting Rates in Mitochondrial Gene Rearrangement between Major Lineages of Psocodea

Hu Li, Renfu Shao, Fan Song, Xuguo Zhou, Qianqian Yang, Zhihong Li, Wanzhi Cai

published 22 Apr 2013

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De novo Sequence Assembly and Characterization of Lycoris aurea Transcriptome Using GS FLX Titanium Platform of 454 Pyrosequencing

Ren Wang, Sheng Xu, Yumei Jiang, Jingwei Jiang, Xiaodan Li, Lijian Liang, Jia He, Feng Peng, Bing Xia

published 09 Apr 2013

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Exploration of Noncoding Sequences in Metagenomes

Fabián Tobar-Tosse, Adrián C. Rodríguez, Patricia E. Vélez, María M. Zambrano, Pedro A. Moreno

published 25 Mar 2013

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H2A.Z Nucleosome Positioning Has No Impact on Genetic Variation in Drosophila Genome

Yitao Tang, Shan Dong, Xinkai Cao, Qing Zhou, Guitao Ding, Cizhong Jiang

published 05 Mar 2013

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canEvolve: A Web Portal for Integrative Oncogenomics

Mehmet Kemal Samur, Zhenyu Yan, Xujun Wang, Qingyi Cao, Nikhil C. Munshi, Cheng Li, Parantu K. Shah

published 13 Feb 2013

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Improving Microbial Genome Annotations in an Integrated Database Context

I-Min A. Chen, Victor M. Markowitz, Ken Chu, Iain Anderson, Konstantinos Mavromatis, Nikos C. Kyrpides, Natalia N. Ivanova

published 12 Feb 2013

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mirTarPri: Improved Prioritization of MicroRNA Targets through Incorporation of Functional Genomics Data

Peng Wang, Shangwei Ning, Qianghu Wang, Ronghong Li, Jingrun Ye, Zuxianglan Zhao, Yan Li, Teng Huang, Xia Li

published 09 Jan 2013

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iPiG: Integrating Peptide Spectrum Matches into Genome Browser Visualizations

Mathias Kuhring, Bernhard Y. Renard

published 04 Dec 2012

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SEED Servers: High-Performance Access to the SEED Genomes, Annotations, and Metabolic Models

Ramy K. Aziz, Scott Devoid, Terrence Disz, Robert A. Edwards, Christopher S. Henry, Gary J. Olsen, Robert Olson, Ross Overbeek, Bruce Parrello, Gordon D. Pusch, Rick L. Stevens, Veronika Vonstein, Fangfang Xia

published 24 Oct 2012

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Comparative Genomics of Serratia spp.: Two Paths towards Endosymbiotic Life

Alejandro Manzano-Marín, Araceli Lamelas, Andrés Moya, Amparo Latorre

published 15 Oct 2012

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Pan-Genomic Analysis Provides Insights into the Genomic Variation and Evolution of Salmonella Paratyphi A

Weili Liang, Yongbing Zhao, Chunxia Chen, Xiaoying Cui, Jun Yu, Jingfa Xiao, Biao Kan

published 19 Sep 2012

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Proteome-Wide Analysis of Functional Divergence in Bacteria: Exploring a Host of Ecological Adaptations

Brian E. Caffrey, Tom A. Williams, Xiaowei Jiang, Christina Toft, Karsten Hokamp, Mario A. Fares

published 26 Apr 2012

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Annotation of the M. tuberculosis Hypothetical Orfeome: Adding Functional Information to More than Half of the Uncharacterized Proteins

Tobias Doerks, Vera van Noort, Pablo Minguez, Peer Bork

published 02 Apr 2012

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