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Functional genomics

Genomic characteristics of Lacticaseibacillus rhamnosus strains isolated from blood

Piotr Jarocki, Jan Sadurski, Martyna Siuda, Mateusz Romanowicz, Jacek Panek, Magdalena Frąc, Adam Waśko

published 31 Oct 2025

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Genome-based metabolic and phylogenomic analysis of three Terrisporobacter species

Tim Böer, Frank R. Bengelsdorf, Mechthild Bömeke, Rolf Daniel, Anja Poehlein

published 10 Oct 2023

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Diverse evolutionary rates and gene duplication patterns among families of functional olfactory receptor genes in humans

Yupeng Wang, Ying Sun, Paule V. Joseph

published 20 Apr 2023

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RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition

Cynthia Paola Rangel-Chávez, Edgardo Galán-Vásquez, Azucena Pescador-Tapia, Luis Delaye, Agustino Martínez-Antonio

published 29 Jul 2021

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Construction of a reference transcriptome for the analysis of male sterility in sugi (Cryptomeria japonica D. Don) focusing on MALE STERILITY 1 (MS1)

Fu-Jin Wei, Saneyoshi Ueno, Tokuko Ujino-Ihara, Maki Saito, Yoshihiko Tsumura, Yuumi Higuchi, Satoko Hirayama, Junji Iwai, Tetsuji Hakamata, Yoshinari Moriguchi

published 25 Feb 2021

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Integrated genome-based probiotic relevance and safety evaluation of Lactobacillus reuteri PNW1

Kazeem Adekunle Alayande, Olayinka Ayobami Aiyegoro, Thizwilondi Michael Nengwekhulu, Lebogang Katata-Seru, Collins Njie Ateba

published 20 Jul 2020

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The protein architecture in Bacteria and Archaea identifies a set of promiscuous and ancient domains

Rafael Hernandez-Guerrero, Edgardo Galán-Vásquez, Ernesto Pérez-Rueda

published 19 Dec 2019

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Maximum parsimony interpretation of chromatin capture experiments

Dirar Homouz, Andrzej S. Kudlicki

published 25 Nov 2019

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Double triage to identify poorly annotated genes in maize: The missing link in community curation

Marcela K. Tello-Ruiz, Cristina F. Marco, Fei-Man Hsu, Rajdeep S. Khangura, Pengfei Qiao, Sirjan Sapkota, Michelle C. Stitzer, Rachael Wasikowski, Hao Wu, Junpeng Zhan, Kapeel Chougule, Lindsay C. Barone, Cornel Ghiban, Demitri Muna, Andrew C. Olson, Liya Wang, Doreen Ware, David A. Micklos

published 28 Oct 2019

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Functional models in genome-wide selection

Ernandes Guedes Moura, Andrezza Kellen Alves Pamplona, Marcio Balestre

published 23 Oct 2019

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Insights from deconvolution of cell subtype proportions enhance the interpretation of functional genomic data

Yu Kong, Deepa Rastogi, Cathal Seoighe, John M. Greally, Masako Suzuki

published 25 Apr 2019

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Integration of heterogeneous functional genomics data in gerontology research to find genes and pathway underlying aging across species

Jason A. Bubier, George L. Sutphin, Timothy J. Reynolds, Ron Korstanje, Axis Fuksman-Kumpa, Erich J. Baker, Michael A. Langston, Elissa J. Chesler

published 12 Apr 2019

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A geographically matched control population efficiently limits the number of candidate disease-causing variants in an unbiased whole-genome analysis

Matilda Rentoft, Daniel Svensson, Andreas Sjödin, Pall I. Olason, Olle Sjöström, Carin Nylander, Pia Osterman, Rickard Sjögren, Sergiu Netotea, Carl Wibom, Kristina Cederquist, Andrei Chabes, Johan Trygg, Beatrice S. Melin, Erik Johansson

published 27 Mar 2019

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