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Forms of DNA

An updated compendium and reevaluation of the evidence for nuclear transcription factor occupancy over the mitochondrial genome

Georgi K Marinov, Vivekanandan Ramalingam, William J Greenleaf, Anshul Kundaje

published 31 Mar 2025

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Genetic and geographical insights call for early conservation of Mae Hong Son’s blue mahseer to prevent population crisis

Tavun Pongsanarm, Thitipong Panthum, Trifan Budi, Wongsathit Wongloet, Aingorn Chaiyes, Chadaphon Thatukan, Wattanawan Jaito, Chananya Patta, Worapong Singchat, Prateep Duengkae, Narongrit Muangmai, Kiatisak Wangwon, Kornsorn Srikulnath

published 12 Feb 2025

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Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality Ghana

Gabriel Temitope Sunmonu, Frederick Adzitey, Erkison Ewomazino Odih, Boniface Awini Tibile, Rejoice Ekli, Martin Aduah, Anderson O. Oaikhena, Olabisi C. Akinlabi, Akebe Luther King Abia, Daniel Gyamfi Amoako, Iruka N. Okeke

published 07 Feb 2025

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PGC-1α activation to enhance macrophage immune function in mycobacterial infections

Joel R. Frandsen, Zhihong Yuan, Brahmchetna Bedi, Zohra Prasla, Seoung-Ryoung Choi, Prabagaran Narayanasamy, Ruxana T. Sadikot

published 06 Feb 2025

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Next-generation sequencing protocol of hematopoietic stem cells (HSCs). Step-by-step overview and troubleshooting guide

Justyna Jarczak, Kamila Bujko, Katarzyna Brzeźniakiewicz-Janus, Mariusz Ratajczak, Magdalena Kucia

published 09 Jan 2025

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Plasmidome of Salmonella enterica serovar Infantis recovered from surface waters in a major agricultural region for leafy greens in California

Beatriz Quiñones, Bertram G. Lee, Ashley Avilés Noriega, Lisa Gorski

published 30 Dec 2024

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Comparative bioacoustics of multiple eastern versus western songbird pairs in North America reveals a gradient of song divergence

Lan-Nhi Phung, David P. L. Toews

published 26 Dec 2024

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Spontaneous mutation in 2310061I04Rik results in reduced expression of mitochondrial genes and impaired brain myelination

Erdyni N. Tsitsikov, Khanh P. Phan, Yufeng Liu, Alla V. Tsytsykova, Rosalia Paterno, David M. Sherry, Anthony C. Johnson, Ian F. Dunn

published 04 Dec 2024

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Canine uropathogenic and avian pathogenic Escherichia coli harboring conjugative plasmids exhibit augmented growth and exopolysaccharide production in response to Enterococcus faecalis

Grayson K. Walker, M. Mitsu Suyemoto, Megan E. Jacob, Siddhartha Thakur, Luke B. Borst

published 27 Nov 2024

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Comprehensive characterization of mitochondrial bioenergetics at different larval stages reveals novel insights about the developmental metabolism of Caenorhabditis elegans

Danielle F. Mello, Luiza Perez, Christina M. Bergemann, Katherine S. Morton, Ian T. Ryde, Joel N. Meyer

published 26 Nov 2024

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An easy-to-use pipeline to analyze amplicon-based Next Generation Sequencing results of human mitochondrial DNA from degraded samples

Daniel R. Cuesta-Aguirre, Assumpció Malgosa, Cristina Santos

published 21 Nov 2024

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Investigation of Astyanax mexicanus (Characiformes, Characidae) chromosome 1 structure reveals unmapped sequences and suggests conserved evolution

Maelin Silva, Duílio Mazzoni Zerbinato Andrade Silva, Jonathan Pena Castro, Alex I. Makunin, Felipe Faix Barby, Edivaldo Herculano Correa de Oliveira, Thomas Liehr, Marcelo Bello Cioffi, Fábio Porto-Foresti, Fausto Foresti, Roberto Ferreira Artoni

published 18 Nov 2024

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Maternal total sleep deprivation causes oxidative stress and mitochondrial dysfunction in oocytes associated with fertility decline in mice

Zi-Yun Yi, Qiu-Xia Liang, Qian Zhou, Lin Yang, Qing-Ren Meng, Jian Li, Yi-hua Lin, Yan-pei Cao, Chun-Hui Zhang, Heide Schatten, Jie Qiao, Qing-Yuan Sun

published 16 Oct 2024

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