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Enzyme structure

Prediction of Detailed Enzyme Functions and Identification of Specificity Determining Residues by Random Forests

Chioko Nagao, Nozomi Nagano, Kenji Mizuguchi

published 08 Jan 2014

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Sparsity as Cellular Objective to Infer Directed Metabolic Networks from Steady-State Metabolome Data: A Theoretical Analysis

Melik Öksüz, Hasan Sadıkoğlu, Tunahan Çakır

published 31 Dec 2013

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Redox Specificity of 2-Hydroxyacid-Coupled NAD⁺/NADH Dehydrogenases: A Study Exploiting “Reactive” Arginine as a Reporter of Protein Electrostatics

Pooja Gupta, Mohamad Aman Jairajpuri, Susheel Durani

published 31 Dec 2013

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Bacterial Community Composition and Extracellular Enzyme Activity in Temperate Streambed Sediment during Drying and Rewetting

Elisabeth Pohlon, Adriana Ochoa Fandino, Jürgen Marxsen

published 27 Dec 2013

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Crystal Structures and Molecular Dynamics Simulations of Thermophilic Malate Dehydrogenase Reveal Critical Loop Motion for Co-Substrate Binding

Chih-Hung Hung, Tzann-Shun Hwang, Yu-Yung Chang, Huei-Ru Luo, Szu-Pei Wu, Chun-Hua Hsu

published 26 Dec 2013

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A Large-Scale Allosteric Transition in Cytochrome P450 3A4 Revealed by Luminescence Resonance Energy Transfer (LRET)

Elena V. Sineva, Jessica A. O. Rumfeldt, James R. Halpert, Dmitri R. Davydov

published 23 Dec 2013

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Structure of the Catalytic Domain of EZH2 Reveals Conformational Plasticity in Cofactor and Substrate Binding Sites and Explains Oncogenic Mutations

Hong Wu, Hong Zeng, Aiping Dong, Fengling Li, Hao He, Guillermo Senisterra, Alma Seitova, Shili Duan, Peter J. Brown, Masoud Vedadi, Cheryl H. Arrowsmith, Matthieu Schapira

published 19 Dec 2013

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Structure and Function of a Novel Cellulase 5 from Sugarcane Soil Metagenome

Thabata M. Alvarez, Joice H. Paiva, Diego M. Ruiz, João Paulo L. F. Cairo, Isabela O. Pereira, Douglas A. A. Paixão, Rodrigo F. de Almeida, Celisa C. C. Tonoli, Roberto Ruller, Camila R. Santos, Fabio M. Squina, Mario T. Murakami

published 17 Dec 2013

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From Knock-Out Phenotype to Three-Dimensional Structure of a Promising Antibiotic Target from Streptococcus pneumoniae

Con Dogovski, Michael A. Gorman, Natalia E. Ketaren, Judy Praszkier, Leanne M. Zammit, Haydyn D. Mertens, Gary Bryant, Ji Yang, Michael D. W. Griffin, F. Grant Pearce, Juliet A. Gerrard, Geoffrey B. Jameson, Michael W. Parker, Roy M. Robins-Browne, Matthew A. Perugini

published 13 Dec 2013

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Dynamics and Flexibility of Human Aromatase Probed by FTIR and Time Resolved Fluorescence Spectroscopy

Giovanna Di Nardo, Maximilian Breitner, Sheila J. Sadeghi, Silvia Castrignanò, Giampiero Mei, Almerinda Di Venere, Eleonora Nicolai, Paola Allegra, Gianfranco Gilardi

published 11 Dec 2013

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Probing the Effect of the Non-Active-Site Mutation Y229W in New Delhi Metallo-β-lactamase-1 by Site-Directed Mutagenesis, Kinetic Studies, and Molecular Dynamics Simulations

Jiao Chen, Hui Chen, Yun Shi, Feng Hu, Xingzhen Lao, Xiangdong Gao, Heng Zheng, Wenbing Yao

published 10 Dec 2013

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Molecular Evolution of Threonine Dehydratase in Bacteria

Xuefei Yu, Ye Li, Xiaoyuan Wang

published 04 Dec 2013

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Structure-Function Features of a Mycoplasma Glycolipid Synthase Derived from Structural Data Integration, Molecular Simulations, and Mutational Analysis

Javier Romero-García, Carles Francisco, Xevi Biarnés, Antoni Planas

published 03 Dec 2013

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