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Differential equations

The Role of Regulated mRNA Stability in Establishing Bicoid Morphogen Gradient in Drosophila Embryonic Development

Wei Liu, Mahesan Niranjan

published 16 Sep 2011

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Graphical Approach to Model Reduction for Nonlinear Biochemical Networks

David O. Holland, Nicholas C. Krainak, Jeffrey J. Saucerman

published 25 Aug 2011

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ENZO: A Web Tool for Derivation and Evaluation of Kinetic Models of Enzyme Catalyzed Reactions

Staš Bevc, Janez Konc, Jure Stojan, Milan Hodošček, Matej Penca, Matej Praprotnik, Dušanka Janežič

published 19 Jul 2011

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A Unique Transformation from Ordinary Differential Equations to Reaction Networks

Sylvain Soliman, Monika Heiner

published 22 Dec 2010

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Feller Processes: The Next Generation in Modeling. Brownian Motion, Lévy Processes and Beyond

Björn Böttcher

published 03 Dec 2010

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DREAM4: Combining Genetic and Dynamic Information to Identify Biological Networks and Dynamical Models

Alex Greenfield, Aviv Madar, Harry Ostrer, Richard Bonneau

published 25 Oct 2010

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A Minimal Model of Signaling Network Elucidates Cell-to-Cell Stochastic Variability in Apoptosis

Subhadip Raychaudhuri

published 11 Aug 2010

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Improved Reconstruction of In Silico Gene Regulatory Networks by Integrating Knockout and Perturbation Data

Kevin Y. Yip, Roger P. Alexander, Koon-Kiu Yan, Mark Gerstein

published 26 Jan 2010

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Structural Analysis to Determine the Core of Hypoxia Response Network

Monika Heiner, K. Sriram

published 19 Jan 2010

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A Many-Body Field Theory Approach to Stochastic Models in Population Biology

Peter J. Dodd, Neil M. Ferguson

published 01 Sep 2009

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Coupled Contagion Dynamics of Fear and Disease: Mathematical and Computational Explorations

Joshua M. Epstein, Jon Parker, Derek Cummings, Ross A. Hammond

published 16 Dec 2008

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Dynamical Systems Analysis of Mitochondrial BAK Activation Kinetics Predicts Resistance to BH3 Domains

Claire Grills, Nyree Crawford, Alex Chacko, Patrick G. Johnston, Francesca O'Rourke, Dean A. Fennell

published 22 Aug 2008

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Boolean Network Model Predicts Cell Cycle Sequence of Fission Yeast

Maria I. Davidich, Stefan Bornholdt

published 27 Feb 2008

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