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Differential equations

A Unique Transformation from Ordinary Differential Equations to Reaction Networks

Sylvain Soliman, Monika Heiner

Feller Processes: The Next Generation in Modeling. Brownian Motion, Lévy Processes and Beyond

Björn Böttcher

DREAM4: Combining Genetic and Dynamic Information to Identify Biological Networks and Dynamical Models

Alex Greenfield, Aviv Madar, Harry Ostrer, Richard Bonneau

A Minimal Model of Signaling Network Elucidates Cell-to-Cell Stochastic Variability in Apoptosis

Subhadip Raychaudhuri

Improved Reconstruction of In Silico Gene Regulatory Networks by Integrating Knockout and Perturbation Data

Kevin Y. Yip, Roger P. Alexander, Koon-Kiu Yan, Mark Gerstein

Structural Analysis to Determine the Core of Hypoxia Response Network

Monika Heiner, K. Sriram

A Many-Body Field Theory Approach to Stochastic Models in Population Biology

Peter J. Dodd, Neil M. Ferguson

Coupled Contagion Dynamics of Fear and Disease: Mathematical and Computational Explorations

Joshua M. Epstein, Jon Parker, Derek Cummings, Ross A. Hammond

Dynamical Systems Analysis of Mitochondrial BAK Activation Kinetics Predicts Resistance to BH3 Domains

Claire Grills, Nyree Crawford, [ ... ], Dean A. Fennell

Boolean Network Model Predicts Cell Cycle Sequence of Fission Yeast

Maria I. Davidich, Stefan Bornholdt

Phenotypic Evolutionary Models in Stem Cell Biology: Replacement, Quiescence, and Variability

Marc Mangel, Michael B. Bonsall

In-Silico Modeling of the Mitotic Spindle Assembly Checkpoint

Bashar Ibrahim, Stephan Diekmann, Eberhard Schmitt, Peter Dittrich

Two Independent Positive Feedbacks and Bistability in the Bcl-2 Apoptotic Switch

Jun Cui, Chun Chen, [ ... ], Pingping Shen

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