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Data management

Phylogenomics: Gene Duplication, Unrecognized Paralogy and Outgroup Choice

Scott William Roy

Are Protein Domains Modules of Lateral Genetic Transfer?

Cheong Xin Chan, Aaron E. Darling, Robert G. Beiko, Mark A. Ragan

Compactness Determines the Success of Cube and Octahedron Self-Assembly

Anum Azam, Timothy G. Leong, Aasiyeh M. Zarafshar, David H. Gracias

Phylogeny in Aid of the Present and Novel Microbial Lineages: Diversity in Bacillus

Shalini Porwal, Sadhana Lal, Simrita Cheema, Vipin Chandra Kalia

Ancient Horizontal Gene Transfer from Bacteria Enhances Biosynthetic Capabilities of Fungi

Imke Schmitt, H. Thorsten Lumbsch

Evidence for Variation in the Effective Population Size of Animal Mitochondrial DNA

Gwenael Piganeau, Adam Eyre-Walker

Phylogenetic Resolution and Quantifying the Phylogenetic Diversity and Dispersion of Communities

Nathan G. Swenson

Probing Evolutionary Patterns in Neotropical Birds through DNA Barcodes

Kevin C. R. Kerr, Darío A. Lijtmaer, [ ... ], Pablo L. Tubaro

The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome

Marina Marcet-Houben, Toni Gabaldón

Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

Compound Evolutionary History of the Rhesus Macaque Mhc Class I B Region Revealed by Microsatellite Analysis and Localization of Retroviral Sequences

Gaby G. M. Doxiadis, Corrine M. C. Heijmans, [ ... ], Ronald E. Bontrop

Genetic Editing of HBV DNA by Monodomain Human APOBEC3 Cytidine Deaminases and the Recombinant Nature of APOBEC3G

Michel Henry, Denise Guétard, [ ... ], Jean-Pierre Vartanian

Evolution of Reproductive Morphology in Leaf Endophytes

Zheng Wang, Peter R. Johnston, Zhu L. Yang, Jeffrey P. Townsend

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