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Computational techniques

Optimization of Time-Course Experiments for Kinetic Model Discrimination

Nuno F. Lages, Carlos Cordeiro, [ ... ], António E. N. Ferreira

Detecting Remote Sequence Homology in Disordered Proteins: Discovery of Conserved Motifs in the N-Termini of Mononegavirales phosphoproteins

David Karlin, Robert Belshaw

Diversity Measures in Environmental Sequences Are Highly Dependent on Alignment Quality—Data from ITS and New LSU Primers Targeting Basidiomycetes

Dirk Krüger, Danuta Kapturska, [ ... ], Tesfaye Wubet

Exploiting Gene Families for Phylogenomic Analysis of Myzostomid Transcriptome Data

Stefanie Hartmann, Conrad Helm, [ ... ], Christoph Bleidorn

Accounting For Alignment Uncertainty in Phylogenomics

Martin Wu, Sourav Chatterji, Jonathan A. Eisen

Two-Stage Clustering (TSC): A Pipeline for Selecting Operational Taxonomic Units for the High-Throughput Sequencing of PCR Amplicons

Xiao-Tao Jiang, Hai Zhang, [ ... ], Hong-Wei Zhou

Armadillo 1.1: An Original Workflow Platform for Designing and Conducting Phylogenetic Analysis and Simulations

Etienne Lord, Mickael Leclercq, [ ... ], Vladimir Makarenkov

Identification of Domains and Amino Acids Essential to the Collagen Galactosyltransferase Activity of GLT25D1

Claire Perrin-Tricaud, Christoph Rutschmann, Thierry Hennet

Special Agents Can Promote Cooperation in the Population

Xin Wang, Jing Han, Huawei Han

Using Amino Acid Correlation and Community Detection Algorithms to Identify Functional Determinants in Protein Families

Lucas Bleicher, Ney Lemke, Richard Charles Garratt

GlyGly-CTERM and Rhombosortase: A C-Terminal Protein Processing Signal in a Many-to-One Pairing with a Rhomboid Family Intramembrane Serine Protease

Daniel H. Haft, Neha Varghese

Calculating Orthologs in Bacteria and Archaea: A Divide and Conquer Approach

Mihail R. Halachev, Nicholas J. Loman, Mark J. Pallen

Identifying Hosts of Families of Viruses: A Machine Learning Approach

Anil Raj, Michael Dewar, [ ... ], Christopher H. Wiggins

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