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Computational techniques

Vitreous Hyper-Reflective Dots in Optical Coherence Tomography and Cystoid Macular Edema after Uneventful Phacoemulsification Surgery

Jong-Hyun Oh, Roy S. Chuck, Jae Rock Do, Choul Yong Park

published 15 Apr 2014

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Redefining the PF06864 Pfam Family Based on Burkholderia pseudomallei PilO2_Bp S-SAD Crystal Structure

Patricia Lassaux, Oscar Conchillo-Solé, Babu A. Manjasetty, Daniel Yero, Lucia Perletti, Hassan Belrhali, Xavier Daura, Louise J. Gourlay, Martino Bolognesi

published 11 Apr 2014

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A System for Household Enumeration and Re-identification in Densely Populated Slums to Facilitate Community Research, Education, and Advocacy

Dana R. Thomson, Shrutika Shitole, Tejal Shitole, Kiran Sawant, Ramnath Subbaraman, David E. Bloom, Anita Patil-Deshmukh

published 10 Apr 2014

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Automated Quantification Reveals Hyperglycemia Inhibits Endothelial Angiogenic Function

Anthony R. Prisco, John D. Bukowy, Brian R. Hoffmann, Jamie R. Karcher, Eric C. Exner, Andrew S. Greene

published 09 Apr 2014

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MC64-ClustalWP2: A Highly-Parallel Hybrid Strategy to Align Multiple Sequences in Many-Core Architectures

David Díaz, Francisco J. Esteban, Pilar Hernández, Juan Antonio Caballero, Antonio Guevara, Gabriel Dorado, Sergio Gálvez

published 07 Apr 2014

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Fast and Accurate Multivariate Gaussian Modeling of Protein Families: Predicting Residue Contacts and Protein-Interaction Partners

Carlo Baldassi, Marco Zamparo, Christoph Feinauer, Andrea Procaccini, Riccardo Zecchina, Martin Weigt, Andrea Pagnani

published 24 Mar 2014

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Where Taxonomy Based on Subtle Morphological Differences Is Perfectly Mirrored by Huge Genetic Distances: DNA Barcoding in Protura (Hexapoda)

Monika Carol Resch, Julia Shrubovych, Daniela Bartel, Nikolaus U. Szucsich, Gerald Timelthaler, Yun Bu, Manfred Walzl, Günther Pass

published 07 Mar 2014

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MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

Wan-Ping Lee, Michael P. Stromberg, Alistair Ward, Chip Stewart, Erik P. Garrison, Gabor T. Marth

published 05 Mar 2014

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TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

Jeffrey C. Glaubitz, Terry M. Casstevens, Fei Lu, James Harriman, Robert J. Elshire, Qi Sun, Edward S. Buckler

published 28 Feb 2014

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Fast Segmentation of Stained Nuclei in Terabyte-Scale, Time Resolved 3D Microscopy Image Stacks

Johannes Stegmaier, Jens C. Otte, Andrei Kobitski, Andreas Bartschat, Ariel Garcia, G. Ulrich Nienhaus, Uwe Strähle, Ralf Mikut

published 27 Feb 2014

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BMI, a Performance Parameter for Speed Improvement

Adrien Sedeaud, Andy Marc, Adrien Marck, Frédéric Dor, Julien Schipman, Maya Dorsey, Amal Haida, Geoffroy Berthelot, Jean-François Toussaint

published 25 Feb 2014

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Evolution and Structural Organization of the C Proteins of Paramyxovirinae

Michael K. Lo, Teit Max Søgaard, David G. Karlin

published 25 Feb 2014

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RNA CoMPASS: A Dual Approach for Pathogen and Host Transcriptome Analysis of RNA-Seq Datasets

Guorong Xu, Michael J. Strong, Michelle R. Lacey, Carl Baribault, Erik K. Flemington, Christopher M. Taylor

published 25 Feb 2014

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