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cDNA libraries

A Low-Cost Library Construction Protocol and Data Analysis Pipeline for Illumina-Based Strand-Specific Multiplex RNA-Seq

Lin Wang, Yaqing Si, [ ... ], Thomas P. Brutnell

Next-Generation Sequencing of RNA and DNA Isolated from Paired Fresh-Frozen and Formalin-Fixed Paraffin-Embedded Samples of Human Cancer and Normal Tissue

Jakob Hedegaard, Kasper Thorsen, [ ... ], Lars Dyrskjøt

Comparison of normalization approaches for gene expression studies completed with high-throughput sequencing

Farnoosh Abbas-Aghababazadeh, Qian Li, Brooke L. Fridley

Optimizing exosomal RNA isolation for RNA-Seq analyses of archival sera specimens

Emily N. Prendergast, Marcos Abraão de Souza Fonseca, [ ... ], Kate Lawrenson

Sequencing Degraded RNA Addressed by 3' Tag Counting

Benjamín Sigurgeirsson, Olof Emanuelsson, Joakim Lundeberg

Poly(A)-seq: A method for direct sequencing and analysis of the transcriptomic poly(A)-tails

Fengyun Yu, Yu Zhang, [ ... ], Yi Zhang

De Novo Transcriptome Sequence Assembly and Analysis of RNA Silencing Genes of Nicotiana benthamiana

Kenlee Nakasugi, Ross N. Crowhurst, [ ... ], Peter M. Waterhouse

A Comparison of RNA-Seq Results from Paired Formalin-Fixed Paraffin-Embedded and Fresh-Frozen Glioblastoma Tissue Samples

Anna Esteve-Codina, Oriol Arpi, [ ... ], on behalf of the GLIOCAT Group

Selective Depletion of rRNA Enables Whole Transcriptome Profiling of Archival Fixed Tissue

John D. Morlan, Kunbin Qu, Dominick V. Sinicropi

Small RNA Library Preparation Method for Next-Generation Sequencing Using Chemical Modifications to Prevent Adapter Dimer Formation

Sabrina Shore, Jordana M. Henderson, [ ... ], Richard I. Hogrefe

Methods for the Preparation of Large Quantities of Complex Single-Stranded Oligonucleotide Libraries

Yusuf E. Murgha, Jean-Marie Rouillard, Erdogan Gulari

A Modified RNA-Seq Approach for Whole Genome Sequencing of RNA Viruses from Faecal and Blood Samples

Elizabeth M. Batty, T. H. Nicholas Wong, [ ... ], Paolo Piazza

A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data

Xiaohong Li, Guy N. Brock, [ ... ], Shesh N. Rai

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