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Biological databases

PUNCH2: Explore the strategy for intrinsically disordered protein predictor

Di Meng, Gianluca Pollastri

published 26 Mar 2025

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Navigating the unstructured by evaluating alphafold’s efficacy in predicting missing residues and structural disorder in proteins

Sen Zheng

published 25 Mar 2025

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Combatting antibiotic resistance in Gardnerella vaginalis: A comparative in silico investigation for drug target identification

Rabbia Riaz, Kanwal Khan, Saltanat Aghayeva, Reaz Uddin

published 12 Mar 2025

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Mis-splicing drives loss of function of p53^E224D point mutation

Ian C. Lock, Nathan H. Leisenring, Warren Floyd, Eric S. Xu, Lixia Luo, Yan Ma, Erin C. Mansell, Diana M. Cardona, Chang-Lung Lee, David G. Kirsch

published 05 Mar 2025

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The binding modes of brazilin and hematein from Caesalpinia sappan L. to Cutibacterium acnes lipase: Simulation studies

Maneenuch Pengsawang, Borvornwat Toviwek, Winyoo Sangthong, Apaporn Boonmee, Phoom Chairatana, Prapasiri Pongprayoon

published 04 Mar 2025

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Multiomics in silico analysis identifies TM4SF4 as a cell surface target in hepatocellular carcinoma

Kah Keng Wong, Suzina Sheikh Ab. Hamid

published 25 Feb 2025

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Mutational alterations in the QRDR regions associated with fluoroquinolone resistance in Pseudomonas aeruginosa of clinical origin from Savar, Dhaka

Md. Shamsul Arefin, Meftahul Jannat Mitu, Shomaia Yasmin Mitu, Azmery Nurjahan, Mir Mobin, Shamsun Nahar, Hasnain Anjum, M. Hasibur Rahman

published 24 Feb 2025

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Identification of novel proteins associated with intelligence by integrating genome-wide association data and human brain proteomics

Zheng Zhang, Yousong Zhu, Junlong Zhang, Wenbin He, Cheng Han

published 21 Feb 2025

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Drug target affinity prediction based on multi-scale gated power graph and multi-head linear attention mechanism

Shuo Hu, Jing Hu, Xiaolong Zhang, Shuting Jin, Xin Xu

published 21 Feb 2025

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Proteomic associations with cognitive variability as measured by the Wisconsin Card Sorting Test in a healthy Thai population: A machine learning approach

Chen Chen, Bupachad Khanthiyong, Benjamard Thaweetee-Sukjai, Sawanya Charoenlappanit, Sittiruk Roytrakul, Phrutthinun Surit, Ittipon Phoungpetchara, Samur Thanoi, Gavin P. Reynolds, Sutisa Nudmamud-Thanoi

published 20 Feb 2025

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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site

Rebecca A. Reiss, Peter A. Guerra, Oleg Makhnin, Matthew Kellom

published 14 Feb 2025

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Identification of Cocconeis neothumensis var. marina using a polyphasic approach including ultrastructure and gene annotation

Emanuele Somma, Maria Costantini, Chiara Pennesi, Nadia Ruocco, Olga De Castro, Antonio Terlizzi, Valerio Zupo

published 13 Feb 2025

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TMT-based quantitative proteomics reveals the genetic mechanisms of secondary hair follicle development in fine-wool sheep

Li-Xia Qiu, Qian Yu, Hua-Qian Zhou, Wen-Hua Fan, Jing-Jing Zheng, Yong-Lin Yang, Wen-Zhe Zhang, Xin Cao, Hua Yang

published 06 Feb 2025

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