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Biological databases

CoSMIC: A hybrid approach for large-scale, high-resolution microbial profiling of novel niches

Maor Knafo, Shahar Rezenman, Tal Idan, Michael Elgart, Shlomi Dagan, Vered Zavaro, Ziv Reich, Ruti Kapon, Dagan Sade, Noam Shental

published 27 Jan 2026

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In silico evaluation of bioactive compounds from the sea urchin Temnopleurus toreumaticus: Potential multifunctional agents against mosquito vectors and tropical pathogens

Karnan Ramachandran, Senthil Bakthavatchalam, Velavan Sivanandham, Shunmuga Vadivu Ramalingam, Pitchaimuthu Mariappan, Renganathan Senthil, Chandramohan Govindasamy, Khalid S. Al-Numair, Ramachandran Vinayagam, Zhi-Hong Wen, Hsien-Kuo Chin

published 23 Jan 2026

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Paleo-proteomic analysis of Iron Age dental calculus provides direct evidence of Scythian reliance on ruminant dairy

Jaruschka Pecnik, Alicia R. Ventresca Miller, Christian Panse, Laura Kunz, Antje Dittmann, James A. Johnson, Sergey Makhortykh, Ludmilla Litvinova, Svetlana Andrukh, Gennady Toschev, Michael Krützen, Verena J. Schuenemann, Shevan Wilkin

published 21 Jan 2026

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Potential mechanisms and effects of AFB₁-induced asthma: A comprehensive analysis based on network toxicology and molecular docking

Zhiyue Yu, Ming Gao, Xiaowen Wu, Jiaxiang Li, Baijun Liu, Rui Wang, Jing Tan, Xiangyan Yu, Limei Geng

published 20 Jan 2026

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Mono-mix strategy enables comparative proteomics of a cross-kingdom microbial symbiosis

Sunnyjoy Dupuis, Usha F. Lingappa, Samuel O. Purvine, Lauren Chiang, Sean D. Gallaher, Carrie D. Nicora, Mary S. Lipton, Sabeeha S. Merchant

published 16 Jan 2026

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Integrative multi-omics and network-based machine learning for early diagnosis of Parkinson’s disease

Wei Liu, Lina Xu, Xuejing Wang, Jiuqi Wang

published 06 Jan 2026

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Candidate orphan genes: Reassessing uniqueness

Sheetalpreet K. Maan, Xuan Y. Butzin, Steven X. Ge, Nicholas C. Butzin

published 31 Dec 2025

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Isolation and characterization of four novel Vibrio parahaemolyticus bacteriophages from oysters

Joud Aldaroub, Chrissy M. Walsky, Rylee E. Ewell, Frank O. Aylward, Ann M. Stevens, Alison Kernell Burke

published 29 Dec 2025

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Optimizing the preparation of labeled N-glycans for rapid, simplified, and high-precision analysis

Riko Makino, Shunji Natsuka

published 16 Dec 2025

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A multi-mineral intervention to improve disease-related and mechanistic biomarkers in ulcerative colitis patients: Results from a randomized trial

Muhammad N. Aslam, Danielle Kim Turgeon, Henry D. Appelman, Ryan Stidham, Shannon McClintock, Ron Allen, Gillian Moraga, Isabelle Harber, Kara J. Jencks, Molly M. McNeely, Ananda Sen, Karl J. Jepsen, James Varani

published 08 Dec 2025

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Megabarcoding dark taxa – Assessing the utility of mass DNA barcoding for phorid fly species discovery

Jiri Vihavainen, Niina Kiljunen, Pekka Pohjola, Jaclyn McKeown, Eveliina Oinonen, Marko Mutanen, Jaakko Pohjoismäki

published 02 Dec 2025

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eDNA reveals spatial differences in species composition of protected rockfishes

Stephanie A. Matthews, Olivia M. Scott, Meredith V. Everett, Megan R. Shaffer, Elizabeth Andruszkiewicz Allan, Andrew O. Shelton, Gregory D. Williams, Abigail Wells, Krista M. Nichols, Ryan P. Kelly

published 01 Dec 2025

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A plasma-based protein signature association with all-cause mortality

Natalia Koziar, Anthony D. Whetton, Nophar Geifman

published 21 Nov 2025

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