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Biological databases

A Critical Tryptophan and Ca²⁺ in Activation and Catalysis of TPPI, the Enzyme Deficient in Classic Late-Infantile Neuronal Ceroid Lipofuscinosis

Salomon Kuizon, Kathleen DiMaiuta, Marius Walus, Edmund C. Jenkins Jr, Marisol Kuizon, Elizabeth Kida, Adam A. Golabek, Daniel O. Espinoza, Raju K. Pullarkat, Mohammed A. Junaid

published 03 Aug 2010

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Prediction of Deleterious Non-Synonymous SNPs Based on Protein Interaction Network and Hybrid Properties

Tao Huang, Ping Wang, Zhi-Qiang Ye, Heng Xu, Zhisong He, Kai-Yan Feng, LeLe Hu, WeiRen Cui, Kai Wang, Xiao Dong, Lu Xie, Xiangyin Kong, Yu-Dong Cai, Yixue Li

published 30 Jul 2010

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Large-Scale Evidence for Conservation of NMD Candidature Across Mammals

David A. de Lima Morais, Paul M. Harrison

published 21 Jul 2010

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Hydrophilicity Matching – A Potential Prerequisite for the Formation of Protein-Protein Complexes in the Cell

Mario Hlevnjak, Gordan Zitkovic, Bojan Zagrovic

published 17 Jun 2010

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“Topological Significance” Analysis of Gene Expression and Proteomic Profiles from Prostate Cancer Cells Reveals Key Mechanisms of Androgen Response

Adaikkalam Vellaichamy, Zoltán Dezső, Lellean JeBailey, Arul M. Chinnaiyan, Arun Sreekumar, Alexey I. Nesvizhskii, Gilbert S. Omenn, Andrej Bugrim

published 03 Jun 2010

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VitAL: Viterbi Algorithm for de novo Peptide Design

E. Besray Unal, Attila Gursoy, Burak Erman

published 02 Jun 2010

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Characterization of a Group of MITEs with Unusual Features from Two Coral Genomes

Shi Wang, Lingling Zhang, Eli Meyer, Mikhail V. Matz

published 18 May 2010

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Oligomeric Interfaces Under the Lens: Gemini

Giovanni Feverati, Claire Lesieur

published 25 Mar 2010

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Discovery of Phytophthora infestans Genes Expressed in Planta through Mining of cDNA Libraries

Roberto Sierra, Luis M. Rodríguez-R, Diego Chaves, Andrés Pinzón, Alejandro Grajales, Alejandro Rojas, Gabriel Mutis, Martha Cárdenas, Daniel Burbano, Pedro Jiménez, Adriana Bernal, Silvia Restrepo

published 24 Mar 2010

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FragKB: Structural and Literature Annotation Resource of Conserved Peptide Fragments and Residues

Ashish V. Tendulkar, Martin Krallinger, Victor de la Torre, Gonzalo López, Pramod P. Wangikar, Alfonso Valencia

published 18 Mar 2010

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An Extended Nomenclature for Mammalian V-ATPase Subunit Genes and Splice Variants

Kevin C. Miranda, Fiona E. Karet, Dennis Brown

published 10 Mar 2010

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Atomic Analysis of Protein-Protein Interfaces with Known Inhibitors: The 2P2I Database

Raphaël Bourgeas, Marie-Jeanne Basse, Xavier Morelli, Philippe Roche

published 09 Mar 2010

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Atomic Interaction Networks in the Core of Protein Domains and Their Native Folds

Venkataramanan Soundararajan, Rahul Raman, S. Raguram, V. Sasisekharan, Ram Sasisekharan

published 23 Feb 2010

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