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Biological databases

Sub-Nanoscale Surface Ruggedness Provides a Water-Tight Seal for Exposed Regions in Soluble Protein Structure

Erica Schulz, Marisa Frechero, Gustavo Appignanesi, Ariel Fernández

published 17 Sep 2010

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Molecular Modeling of Mechanosensory Ion Channel Structural and Functional Features

Renate Gessmann, Nikos Kourtis, Kyriacos Petratos, Nektarios Tavernarakis

published 16 Sep 2010

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A Score of the Ability of a Three-Dimensional Protein Model to Retrieve Its Own Sequence as a Quantitative Measure of Its Quality and Appropriateness

León P. Martínez-Castilla, Rogelio Rodríguez-Sotres

published 07 Sep 2010

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Identification of cis-Regulatory Elements in the Mammalian Genome: The cREMaG Database

Marcin Piechota, Michal Korostynski, Ryszard Przewlocki

published 31 Aug 2010

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Gut Microbial Gene Expression in Mother-Fed and Formula-Fed Piglets

Valeriy Poroyko, James Robert White, Mei Wang, Sharon Donovan, John Alverdy, Donald C. Liu, Michael J. Morowitz

published 27 Aug 2010

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Presaging Critical Residues in Protein interfaces-Web Server (PCRPi-W): A Web Server to Chart Hot Spots in Protein Interfaces

Joan Segura Mora, Salam A. Assi, Narcis Fernandez-Fuentes

published 23 Aug 2010

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A Structure-Based Approach for Mapping Adverse Drug Reactions to the Perturbation of Underlying Biological Pathways

Izhar Wallach, Navdeep Jaitly, Ryan Lilien

published 23 Aug 2010

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Rapid Dopaminergic Modulation of the Fish Hypothalamic Transcriptome and Proteome

Jason T. Popesku, Christopher J. Martyniuk, Nancy D. Denslow, Vance L. Trudeau

published 20 Aug 2010

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Oligonucleotide Frequencies of Barcoding Loci Can Discriminate Species across Kingdoms

Antariksh Tyagi, Sumit K. Bag, Virendra Shukla, Sribash Roy, Rakesh Tuli

published 20 Aug 2010

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Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis

Felix Rückert, Gihan Dawelbait, Christof Winter, Arndt Hartmann, Axel Denz, Ole Ammerpohl, Michael Schroeder, Hans Konrad Schackert, Bence Sipos, Günter Klöppel, Holger Kalthoff, Hans-Detlev Saeger, Christian Pilarsky, Robert Grützmann

published 19 Aug 2010

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Binding of Protein Kinase Inhibitors to Synapsin I Inferred from Pair-Wise Binding Site Similarity Measurements

Enrico De Franchi, Claire Schalon, Mirko Messa, Franco Onofri, Fabio Benfenati, Didier Rognan

published 16 Aug 2010

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Targeted Therapy Database (TTD): A Model to Match Patient's Molecular Profile with Current Knowledge on Cancer Biology

Simone Mocellin, Jeff Shrager, Richard Scolyer, Sandro Pasquali, Daunia Verdi, Francesco M. Marincola, Marta Briarava, Randy Gobbel, Carlo Rossi, Donato Nitti

published 10 Aug 2010

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Superpose3D: A Local Structural Comparison Program That Allows for User-Defined Structure Representations

Pier Federico Gherardini, Gabriele Ausiello, Manuela Helmer-Citterich

published 05 Aug 2010

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