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Biological databases

Oligonucleotide Frequencies of Barcoding Loci Can Discriminate Species across Kingdoms

Antariksh Tyagi, Sumit K. Bag, Virendra Shukla, Sribash Roy, Rakesh Tuli

published 20 Aug 2010

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Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis

Felix Rückert, Gihan Dawelbait, Christof Winter, Arndt Hartmann, Axel Denz, Ole Ammerpohl, Michael Schroeder, Hans Konrad Schackert, Bence Sipos, Günter Klöppel, Holger Kalthoff, Hans-Detlev Saeger, Christian Pilarsky, Robert Grützmann

published 19 Aug 2010

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Binding of Protein Kinase Inhibitors to Synapsin I Inferred from Pair-Wise Binding Site Similarity Measurements

Enrico De Franchi, Claire Schalon, Mirko Messa, Franco Onofri, Fabio Benfenati, Didier Rognan

published 16 Aug 2010

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Targeted Therapy Database (TTD): A Model to Match Patient's Molecular Profile with Current Knowledge on Cancer Biology

Simone Mocellin, Jeff Shrager, Richard Scolyer, Sandro Pasquali, Daunia Verdi, Francesco M. Marincola, Marta Briarava, Randy Gobbel, Carlo Rossi, Donato Nitti

published 10 Aug 2010

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Superpose3D: A Local Structural Comparison Program That Allows for User-Defined Structure Representations

Pier Federico Gherardini, Gabriele Ausiello, Manuela Helmer-Citterich

published 05 Aug 2010

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A Critical Tryptophan and Ca²⁺ in Activation and Catalysis of TPPI, the Enzyme Deficient in Classic Late-Infantile Neuronal Ceroid Lipofuscinosis

Salomon Kuizon, Kathleen DiMaiuta, Marius Walus, Edmund C. Jenkins Jr, Marisol Kuizon, Elizabeth Kida, Adam A. Golabek, Daniel O. Espinoza, Raju K. Pullarkat, Mohammed A. Junaid

published 03 Aug 2010

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Prediction of Deleterious Non-Synonymous SNPs Based on Protein Interaction Network and Hybrid Properties

Tao Huang, Ping Wang, Zhi-Qiang Ye, Heng Xu, Zhisong He, Kai-Yan Feng, LeLe Hu, WeiRen Cui, Kai Wang, Xiao Dong, Lu Xie, Xiangyin Kong, Yu-Dong Cai, Yixue Li

published 30 Jul 2010

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Large-Scale Evidence for Conservation of NMD Candidature Across Mammals

David A. de Lima Morais, Paul M. Harrison

published 21 Jul 2010

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Hydrophilicity Matching – A Potential Prerequisite for the Formation of Protein-Protein Complexes in the Cell

Mario Hlevnjak, Gordan Zitkovic, Bojan Zagrovic

published 17 Jun 2010

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“Topological Significance” Analysis of Gene Expression and Proteomic Profiles from Prostate Cancer Cells Reveals Key Mechanisms of Androgen Response

Adaikkalam Vellaichamy, Zoltán Dezső, Lellean JeBailey, Arul M. Chinnaiyan, Arun Sreekumar, Alexey I. Nesvizhskii, Gilbert S. Omenn, Andrej Bugrim

published 03 Jun 2010

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VitAL: Viterbi Algorithm for de novo Peptide Design

E. Besray Unal, Attila Gursoy, Burak Erman

published 02 Jun 2010

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Characterization of a Group of MITEs with Unusual Features from Two Coral Genomes

Shi Wang, Lingling Zhang, Eli Meyer, Mikhail V. Matz

published 18 May 2010

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Oligomeric Interfaces Under the Lens: Gemini

Giovanni Feverati, Claire Lesieur

published 25 Mar 2010

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