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Biological databases

Improving Disease Gene Prioritization by Comparing the Semantic Similarity of Phenotypes in Mice with Those of Human Diseases

Anika Oellrich, Robert Hoehndorf, Georgios V. Gkoutos, Dietrich Rebholz-Schuhmann

published 14 Jun 2012

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How Many Protein-Protein Interactions Types Exist in Nature?

Leonardo Garma, Srayanta Mukherjee, Pralay Mitra, Yang Zhang

published 13 Jun 2012

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Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

John Martin, Sean Sykes, Sarah Young, Karthik Kota, Ravi Sanka, Nihar Sheth, Joshua Orvis, Erica Sodergren, Zhengyuan Wang, George M. Weinstock, Makedonka Mitreva

published 13 Jun 2012

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VoSeq: A Voucher and DNA Sequence Web Application

Carlos Peña, Tobias Malm

published 12 Jun 2012

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Identification of Rays through DNA Barcoding: An Application for Ecologists

Florencia Cerutti-Pereyra, Mark G. Meekan, Nu-Wei V. Wei, Owen O'Shea, Corey J. A. Bradshaw, Chris M. Austin

published 11 Jun 2012

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Detecting Mutually Exclusive Interactions in Protein-Protein Interaction Maps

Carmen Sánchez Claros, Anna Tramontano

published 08 Jun 2012

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Comparative Analysis of the 5S rRNA and Its Associated Proteins Reveals Unique Primitive Rather Than Parasitic Features in Giardia lamblia

Jin-Mei Feng, Jun Sun, De-Dong Xin, Jian-Fan Wen

published 07 Jun 2012

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DNA Barcoding the Native Flowering Plants and Conifers of Wales

Natasha de Vere, Tim C. G. Rich, Col R. Ford, Sarah A. Trinder, Charlotte Long, Chris W. Moore, Danielle Satterthwaite, Helena Davies, Joel Allainguillaume, Sandra Ronca, Tatiana Tatarinova, Hannah Garbett, Kevin Walker, Mike J. Wilkinson

published 06 Jun 2012

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Protein-Protein Interaction Site Predictions with Three-Dimensional Probability Distributions of Interacting Atoms on Protein Surfaces

Ching-Tai Chen, Hung-Pin Peng, Jhih-Wei Jian, Keng-Chang Tsai, Jeng-Yih Chang, Ei-Wen Yang, Jun-Bo Chen, Shinn-Ying Ho, Wen-Lian Hsu, An-Suei Yang

published 06 Jun 2012

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New Mutations in Chronic Lymphocytic Leukemia Identified by Target Enrichment and Deep Sequencing

Elena Doménech, Gonzalo Gómez-López, Daniel Gzlez-Peña, Mar López, Beatriz Herreros, Juliane Menezes, Natalia Gómez-Lozano, Angel Carro, Osvaldo Graña, David G. Pisano, Orlando Domínguez, José A. García-Marco, Miguel A. Piris, Margarita Sánchez-Beato

published 01 Jun 2012

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Prediction of Molecular Targets of Cancer Preventing Flavonoid Compounds Using Computational Methods

Hanyong Chen, Ke Yao, Janos Nadas, Ann M. Bode, Margarita Malakhova, Naomi Oi, Haitao Li, Ronald A. Lubet, Zigang Dong

published 31 May 2012

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KRASness and PIK3CAness in Patients with Advanced Colorectal Cancer: Outcome after Treatment with Early-Phase Trials with Targeted Pathway Inhibitors

Ignacio Garrido-Laguna, David S. Hong, Filip Janku, Ly M. Nguyen, Gerald S. Falchook, Siqing Fu, Jenifer J. Wheler, Rajyalakshmi Luthra, Aung Naing, Xuemei Wang, Razelle Kurzrock

published 31 May 2012

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Phylogenetic Analysis of a Spontaneous Cocoa Bean Fermentation Metagenome Reveals New Insights into Its Bacterial and Fungal Community Diversity

Koen Illeghems, Luc De Vuyst, Zoi Papalexandratou, Stefan Weckx

published 29 May 2012

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