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Biological databases

Utility of the trnH–psbA Intergenic Spacer Region and Its Combinations as Plant DNA Barcodes: A Meta-Analysis

Xiaohui Pang, Chang Liu, Linchun Shi, Rui Liu, Dong Liang, Huan Li, Stacey S. Cherny, Shilin Chen

published 14 Nov 2012

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Establishment and Characterization of a Highly Tumourigenic and Cancer Stem Cell Enriched Pancreatic Cancer Cell Line as a Well Defined Model System

Johannes Fredebohm, Michael Boettcher, Christian Eisen, Matthias M. Gaida, Anette Heller, Shereen Keleg, Jörg Tost, Karin M. Greulich-Bode, Agnes Hotz-Wagenblatt, Mark Lathrop, Nathalia A. Giese, Jörg D. Hoheisel

published 12 Nov 2012

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Screening for and Verification of Novel Mutations Associated with Drug Resistance in the HIV Type 1subtype B^′ in China

Hanping Li, Qingmao Geng, Wei Guo, Daomin Zhuang, Lin Li, Yongjian Liu, Zuoyi Bao, Siyang Liu, Jingyun Li

published 08 Nov 2012

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Molecular Dissection of the Basal Clades in the Human Y Chromosome Phylogenetic Tree

Rosaria Scozzari, Andrea Massaia, Eugenia D’Atanasio, Natalie M. Myres, Ugo A. Perego, Beniamino Trombetta, Fulvio Cruciani

published 07 Nov 2012

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Predicting Turns in Proteins with a Unified Model

Qi Song, Tonghua Li, Peisheng Cong, Jiangming Sun, Dapeng Li, Shengnan Tang

published 07 Nov 2012

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Assessing Predictors of Changes in Protein Stability upon Mutation Using Self-Consistency

Grant Thiltgen, Richard A. Goldstein

published 29 Oct 2012

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Proteomic Properties Reveal Phyloecological Clusters of Archaea

Nela Nikolic, Zlatko Smole, Anita Krisko

published 25 Oct 2012

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SEED Servers: High-Performance Access to the SEED Genomes, Annotations, and Metabolic Models

Ramy K. Aziz, Scott Devoid, Terrence Disz, Robert A. Edwards, Christopher S. Henry, Gary J. Olsen, Robert Olson, Ross Overbeek, Bruce Parrello, Gordon D. Pusch, Rick L. Stevens, Veronika Vonstein, Fangfang Xia

published 24 Oct 2012

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Mutation Analysis of BRCA1, BRCA2, PALB2 and BRD7 in a Hospital-Based Series of German Patients with Triple-Negative Breast Cancer

Franziska Pern, Natalia Bogdanova, Peter Schürmann, Min Lin, Aysun Ay, Florian Länger, Peter Hillemanns, Hans Christiansen, Tjoung-Won Park-Simon, Thilo Dörk

published 24 Oct 2012

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MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit

Jens Roat Kultima, Shinichi Sunagawa, Junhua Li, Weineng Chen, Hua Chen, Daniel R. Mende, Manimozhiyan Arumugam, Qi Pan, Binghang Liu, Junjie Qin, Jun Wang, Peer Bork

published 17 Oct 2012

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De Novo Assembly, Characterization and Functional Annotation of Pineapple Fruit Transcriptome through Massively Parallel Sequencing

Wen Dee Ong, Lok-Yung Christopher Voo, Vijay Subbiah Kumar

published 16 Oct 2012

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TRIP Database 2.0: A Manually Curated Information Hub for Accessing TRP Channel Interaction Network

Young-Cheul Shin, Soo-Yong Shin, Jung Nyeo Chun, Hyeon Sung Cho, Jin Muk Lim, Hong-Gee Kim, Insuk So, Dongseop Kwon, Ju-Hong Jeon

published 11 Oct 2012

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Can the Energy Gap in the Protein-Ligand Binding Energy Landscape Be Used as a Descriptor in Virtual Ligand Screening?

Arsen V. Grigoryan, Hong Wang, Timothy J. Cardozo

published 10 Oct 2012

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