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Biological databases

Mutational alterations in the QRDR regions associated with fluoroquinolone resistance in Pseudomonas aeruginosa of clinical origin from Savar, Dhaka

Md. Shamsul Arefin, Meftahul Jannat Mitu, Shomaia Yasmin Mitu, Azmery Nurjahan, Mir Mobin, Shamsun Nahar, Hasnain Anjum, M. Hasibur Rahman

published 24 Feb 2025

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Identification of novel proteins associated with intelligence by integrating genome-wide association data and human brain proteomics

Zheng Zhang, Yousong Zhu, Junlong Zhang, Wenbin He, Cheng Han

published 21 Feb 2025

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Drug target affinity prediction based on multi-scale gated power graph and multi-head linear attention mechanism

Shuo Hu, Jing Hu, Xiaolong Zhang, Shuting Jin, Xin Xu

published 21 Feb 2025

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Proteomic associations with cognitive variability as measured by the Wisconsin Card Sorting Test in a healthy Thai population: A machine learning approach

Chen Chen, Bupachad Khanthiyong, Benjamard Thaweetee-Sukjai, Sawanya Charoenlappanit, Sittiruk Roytrakul, Phrutthinun Surit, Ittipon Phoungpetchara, Samur Thanoi, Gavin P. Reynolds, Sutisa Nudmamud-Thanoi

published 20 Feb 2025

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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site

Rebecca A. Reiss, Peter A. Guerra, Oleg Makhnin, Matthew Kellom

published 14 Feb 2025

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Identification of Cocconeis neothumensis var. marina using a polyphasic approach including ultrastructure and gene annotation

Emanuele Somma, Maria Costantini, Chiara Pennesi, Nadia Ruocco, Olga De Castro, Antonio Terlizzi, Valerio Zupo

published 13 Feb 2025

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TMT-based quantitative proteomics reveals the genetic mechanisms of secondary hair follicle development in fine-wool sheep

Li-Xia Qiu, Qian Yu, Hua-Qian Zhou, Wen-Hua Fan, Jing-Jing Zheng, Yong-Lin Yang, Wen-Zhe Zhang, Xin Cao, Hua Yang

published 06 Feb 2025

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Respiratory extracellular vesicle isolation optimization through proteomic profiling of equine samples and identification of candidates for cell-of-origin studies

Elise Hickman, Victoria Carberry, Celeste Carberry, Bethanie Cooper, Angie L. Mordant, Allie Mills, Marina Sokolsky, Laura E. Herring, Neil E. Alexis, Meghan E. Rebuli, Ilona Jaspers, Katie Sheats, Julia E. Rager

published 24 Jan 2025

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Investigation of biometabolites and novel antimicrobial peptides derived from promising source Cordyceps militaris and effect of non-small cell lung cancer genes computationally

Muhammad Afzal, Mai Abdel Haleem A. Abusalah, Neelum Shehzadi, Muhammad Absar, Naveed Ahmed, Sarmir Khan, Yalnaz Naseem, Noshaba Mehmood, Kirnpal Kaur Banga Singh

published 23 Jan 2025

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Ongoing measles outbreak in Romania: Clinical investigation and molecular epidemiology performed on whole genome sequences

Robert Hohan, Marius Surleac, Victor Daniel Miron, Andreea Tudor, Ana-Maria Tudor, Oana Săndulescu, Ovidiu Vlaicu, Victoria Aramă, Daniela Pițigoi, Adriana Hristea, Anca Cristina Drăgănescu, Dimitrios Paraskevis, Leontina Bănică, Dan Oțelea, Simona Paraschiv

published 15 Jan 2025

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Fracture-healing effects of Rhizoma Musae ethanolic extract: An integrated study using UHPLC-Q-Exactive-MS/MS, network pharmacology, and molecular docking

Jian Zhang, Wanyan Shen, Fanzhi Liu, Hehe He, Shuquan Han, Lina Luo

published 14 Jan 2025

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Biophysical and biochemical evidence for the role of acetate kinases (AckAs) in an acetogenic pathway in pathogenic spirochetes

Ranjit K. Deka, Shih-Chia Tso, Wei Z. Liu, Chad A. Brautigam

published 09 Jan 2025

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Using DNA metabarcoding and direct behavioural observations to identify the diet of proboscis monkeys (Nasalis larvatus) in the Kinabatangan Floodplain, Sabah

Valentine Thiry, Arthur F. Boom, Danica J. Stark, Olivier J. Hardy, Roseline C. Beudels-Jamar, Regine Vercauteren Drubbel, Sylvia Alsisto, Martine Vercauteren, Benoit Goossens

published 03 Jan 2025

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