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Bioinformatics

Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design

Linda Zheng, Paul J. Wayper, [ ... ], Mark J. Gibbs

Predicted Functional RNAs within Coding Regions Constrain Evolutionary Rates of Yeast Proteins

Charles D. Warden, Seong-Ho Kim, Soojin V. Yi

An Update on MyoD Evolution in Teleosts and a Proposed Consensus Nomenclature to Accommodate the Tetraploidization of Different Vertebrate Genomes

Daniel J. Macqueen, Ian A. Johnston

The Plasmodium Export Element Revisited

Jan Alexander Hiss, Jude Marek Przyborski, [ ... ], Gisbert Schneider

Natural Selection and Adaptive Evolution of Leptin in the Ochotona Family Driven by the Cold Environmental Stress

Jie Yang, Zhen Long Wang, [ ... ], Hui Fang Tian

The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples

Shannon J. Williamson, Douglas B. Rusch, [ ... ], J. Craig Venter

Polyploidization as a Retraction Force in Plant Genome Evolution: Sequence Rearrangements in Triticale

Miguel Bento, H. Sofia Pereira, [ ... ], Manuela Silva

A High Quality Draft Consensus Sequence of the Genome of a Heterozygous Grapevine Variety

Riccardo Velasco, Andrey Zharkikh, [ ... ], Roberto Viola

Identification of Novel Drosophila melanogaster MicroRNAs

Thomas Sandmann, Stephen M. Cohen

An Intronic Signal for Alternative Splicing in the Human Genome

Necat Havlioglu, Jun Wang, [ ... ], Jane Y. Wu

Evolutionarily Conserved Protein Sequences of Influenza A Viruses, Avian and Human, as Vaccine Targets

A. T. Heiny, Olivo Miotto, [ ... ], J. Thomas August

Putative Zinc Finger Protein Binding Sites Are Over-Represented in the Boundaries of Methylation-Resistant CpG Islands in the Human Genome

Shicai Fan, Fang Fang, Xuegong Zhang, Michael Q. Zhang

Rapid Changes in Gene Expression Dynamics in Response to Superoxide Reveal SoxRS-Dependent and Independent Transcriptional Networks

Jeffrey L. Blanchard, Wei-Yun Wholey, Erin M. Conlon, Pablo J. Pomposiello

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