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Bioinformatics

Sequence Relationships among C. elegans, D. melanogaster and Human microRNAs Highlight the Extensive Conservation of microRNAs in Biology

Carolina Ibáñez-Ventoso, Mehul Vora, Monica Driscoll

Conserved Secondary Structures in Aspergillus

Abigail Manson McGuire, James E. Galagan

Multiple Multilocus DNA Barcodes from the Plastid Genome Discriminate Plant Species Equally Well

Aron J. Fazekas, Kevin S. Burgess, [ ... ], Spencer C. H. Barrett

Comparative 3'UTR Analysis Allows Identification of Regulatory Clusters that Drive Eph/ephrin Expression in Cancer Cell Lines

Jennifer Winter, Stefan Roepcke, [ ... ], Susann Schweiger

Seasonality of Influenza A(H3N2) Virus: A Hong Kong Perspective (1997–2006)

Julian W. Tang, Karry L. K. Ngai, Wai Y. Lam, Paul K. S. Chan

Targeted Development of Registries of Biological Parts

Jean Peccoud, Megan F. Blauvelt, [ ... ], Sally A. Waldon

The Actinome of Dictyostelium discoideum in Comparison to Actins and Actin-Related Proteins from Other Organisms

Jayabalan M. Joseph, Petra Fey, [ ... ], Michael Schleicher

Phylogenetic Detection of Recombination with a Bayesian Prior on the Distance between Trees

Leonardo de Oliveira Martins, Élcio Leal, Hirohisa Kishino

Local Alignment Refinement Using Structural Assessment

Pierre Chodanowski, Aurélien Grosdidier, Ernest Feytmans, Olivier Michielin

Lateral Transfer of a Lectin-Like Antifreeze Protein Gene in Fishes

Laurie A. Graham, Stephen C. Lougheed, K. Vanya Ewart, Peter L. Davies

CyclinPred: A SVM-Based Method for Predicting Cyclin Protein Sequences

Mridul K. Kalita, Umesh K. Nandal, [ ... ], Dinesh Gupta

An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP)

Dongying Wu, Amber Hartman, Naomi Ward, Jonathan A. Eisen

Contextual Specificity in Peptide-Mediated Protein Interactions

Amelie Stein, Patrick Aloy

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