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Bioinformatics

Large-Scale Identification of Mirtrons in Arabidopsis and Rice

Yijun Meng, Chaogang Shao

published 13 Feb 2012

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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample

Chengwei Luo, Despina Tsementzi, Nikos Kyrpides, Timothy Read, Konstantinos T. Konstantinidis

published 10 Feb 2012

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Sequence Polymorphism, Segmental Recombination and Toggling Amino Acid Residues within the DBL3X Domain of the VAR2CSA Placental Malaria Antigen

Eldin Talundzic, Sheel Shah, Ope Fawole, Simon Owino, Julie M. Moore, David S. Peterson

published 09 Feb 2012

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Whole Genome Resequencing Reveals Natural Target Site Preferences of Transposable Elements in Drosophila melanogaster

Raquel S. Linheiro, Casey M. Bergman

published 09 Feb 2012

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Composite Structural Motifs of Binding Sites for Delineating Biological Functions of Proteins

Akira R. Kinjo, Haruki Nakamura

published 08 Feb 2012

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Over-Expression of a Cytochrome P450 Is Associated with Resistance to Pyriproxyfen in the Greenhouse Whitefly Trialeurodes vaporariorum

Nikos Karatolos, Martin S. Williamson, Ian Denholm, Kevin Gorman, Richard H. ffrench-Constant, Chris Bass

published 08 Feb 2012

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Effects of a Non-Conservative Sequence on the Properties of β-glucuronidase from Aspergillus terreus Li-20

Yanli Liu, Jie Huangfu, Feng Qi, Imdad Kaleem, Wenwen E, Chun Li

published 07 Feb 2012

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Independent Large Scale Duplications in Multiple M. tuberculosis Lineages Overlapping the Same Genomic Region

Brian Weiner, James Gomez, Thomas C. Victor, Robert M. Warren, Alexander Sloutsky, Bonnie B. Plikaytis, James E. Posey, Paul D. van Helden, Nicolass C. Gey van Pittius, Michael Koehrsen, Peter Sisk, Christian Stolte, Jared White, Sebastien Gagneux, Bruce Birren, Deborah Hung, Megan Murray, James Galagan

published 07 Feb 2012

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Characterization of Three Novel SINE Families with Unusual Features in Helicoverpa armigera

Jianjun Wang, Aina Wang, Zhaojun Han, Zan Zhang, Fei Li, Xianchun Li

published 03 Feb 2012

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CAPRG: Sequence Assembling Pipeline for Next Generation Sequencing of Non-Model Organisms

Arun Rawat, Mohamed O. Elasri, Kurt A. Gust, Glover George, Don Pham, Leona D. Scanlan, Chris Vulpe, Edward J. Perkins

published 03 Feb 2012

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Sequence Heterogeneity in NS5A of Hepatitis C Virus Genotypes 2a and 2b and Clinical Outcome of Pegylated-Interferon/Ribavirin Therapy

Ahmed El-Shamy, Ikuo Shoji, Soo-Ryang Kim, Yoshihiro Ide, Susumu Imoto, Lin Deng, Seitetsu Yoon, Takashi Fujisawa, Satoshi Tani, Yoshihiko Yano, Yasushi Seo, Takeshi Azuma, Hak Hotta

published 02 Feb 2012

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Circular RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes in Diverse Cell Types

Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, Patrick O. Brown

published 01 Feb 2012

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Predicting Target DNA Sequences of DNA-Binding Proteins Based on Unbound Structures

Chien-Yu Chen, Ting-Ying Chien, Chih-Kang Lin, Chih-Wei Lin, Yi-Zhong Weng, Darby Tien-Hao Chang

published 01 Feb 2012

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