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Bioinformatics

An Improvement of Shotgun Proteomics Analysis by Adding Next-Generation Sequencing Transcriptome Data in Orange

Jiaping Song, Renjie Sun, Dazhi Li, Fengji Tan, Xin Li, Pingping Jiang, Xinjie Huang, Liang Lin, Ziniu Deng, Yong Zhang

published 29 Jun 2012

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SECOM: A Novel Hash Seed and Community Detection Based-Approach for Genome-Scale Protein Domain Identification

Ming Fan, Ka-Chun Wong, Taewoo Ryu, Timothy Ravasi, Xin Gao

published 28 Jun 2012

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Structure-Function Analysis of Human TYW2 Enzyme Required for the Biosynthesis of a Highly Modified Wybutosine (yW) Base in Phenylalanine-tRNA

Virginia Rodriguez, Sona Vasudevan, Akiko Noma, Bradley A. Carlson, Jeffrey E. Green, Tsutomu Suzuki, Settara C. Chandrasekharappa

published 28 Jun 2012

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FusionFinder: A Software Tool to Identify Expressed Gene Fusion Candidates from RNA-Seq Data

Richard W. Francis, Katherine Thompson-Wicking, Kim W. Carter, Denise Anderson, Ursula R. Kees, Alex H. Beesley

published 27 Jun 2012

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Transcriptome Sequencing and Comparative Analysis of Saccharina japonica (Laminariales, Phaeophyceae) under Blue Light Induction

Yunyan Deng, Jianting Yao, Xiuliang Wang, Hui Guo, Delin Duan

published 27 Jun 2012

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Molecular Identification of Commercialized Medicinal Plants in Southern Morocco

Anneleen Kool, Hugo J. de Boer, Åsa Krüger, Anders Rydberg, Abdelaziz Abbad, Lars Björk, Gary Martin

published 27 Jun 2012

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Image Correlation Method for DNA Sequence Alignment

Millaray Curilem Saldías, Felipe Villarroel Sassarini, Carlos Muñoz Poblete, Asticio Vargas Vásquez, Iván Maureira Butler

published 27 Jun 2012

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Metagenomes of the Picoalga Bathycoccus from the Chile Coastal Upwelling

Daniel Vaulot, Cécile Lepère, Eve Toulza, Rodrigo De la Iglesia, Julie Poulain, Frédéric Gaboyer, Hervé Moreau, Klaas Vandepoele, Osvaldo Ulloa, Frederick Gavory, Gwenael Piganeau

published 22 Jun 2012

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Common and Distant Structural Characteristics of Feruloyl Esterase Families from Aspergillus oryzae

D. B. R. K. Gupta Udatha, Valeria Mapelli, Gianni Panagiotou, Lisbeth Olsson

published 22 Jun 2012

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Cooperativity among Short Amyloid Stretches in Long Amyloidogenic Sequences

Lele Hu, Weiren Cui, Zhisong He, Xiaohe Shi, Kaiyan Feng, Buyong Ma, Yu-Dong Cai

published 22 Jun 2012

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Immunoglobulin Genomics in the Guinea Pig (Cavia porcellus)

Yongchen Guo, Yonghua Bao, Qingwen Meng, Xiaoxiang Hu, Qingyong Meng, Liming Ren, Ning Li, Yaofeng Zhao

published 22 Jun 2012

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Local Structural Differences in Homologous Proteins: Specificities in Different SCOP Classes

Agnel Praveen Joseph, Hélène Valadié, Narayanaswamy Srinivasan, Alexandre G. de Brevern

published 22 Jun 2012

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Bovine Polledness – An Autosomal Dominant Trait with Allelic Heterogeneity

Ivica Medugorac, Doris Seichter, Alexander Graf, Ingolf Russ, Helmut Blum, Karl Heinrich Göpel, Sophie Rothammer, Martin Förster, Stefan Krebs

published 21 Jun 2012

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