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Bioinformatics

Mutational alterations in the QRDR regions associated with fluoroquinolone resistance in Pseudomonas aeruginosa of clinical origin from Savar, Dhaka

Md. Shamsul Arefin, Meftahul Jannat Mitu, Shomaia Yasmin Mitu, Azmery Nurjahan, Mir Mobin, Shamsun Nahar, Hasnain Anjum, M. Hasibur Rahman

published 24 Feb 2025

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Leveraging large language models for data analysis automation

Jacqueline A. Jansen, Artür Manukyan, Nour Al Khoury, Altuna Akalin

published 21 Feb 2025

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“Pet effect” patterns: Dynamics of animal presence and caregiver affect across (tele)work and non-work contexts

Joni Delanoeije, Miriam Engels, Mayke Janssens

published 20 Feb 2025

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A personalized reinforcement learning recommendation algorithm using bi-clustering techniques

Muhammad Waqar, Mubbashir Ayub

published 20 Feb 2025

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NPR1-like genes in Theobroma cacao: Evolutionary insights and potential in enhancing resistance to Phytophthora megakarya

Muhammad Umar Rasheed, Aiman Malik, Muhammad Zeshan Haider, Adnan Sami, Muhammad Shafiq, Qurban Ali, Muhammad Arshad Javed, Ansar Ali

published 14 Feb 2025

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Cloning and bioinformatics analysis of key gene ShOMT3 of podophyllotoxin biosynthesis pathway in Sinopodophyllum hexandrum

Wei Liu, Haona Gao, Dan Zhao, Shuying Li, Lu Li, Xiufang Zhao, Zheng Zhang, Dongxue Yin

published 14 Feb 2025

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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site

Rebecca A. Reiss, Peter A. Guerra, Oleg Makhnin, Matthew Kellom

published 14 Feb 2025

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Identification of Cocconeis neothumensis var. marina using a polyphasic approach including ultrastructure and gene annotation

Emanuele Somma, Maria Costantini, Chiara Pennesi, Nadia Ruocco, Olga De Castro, Antonio Terlizzi, Valerio Zupo

published 13 Feb 2025

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A new method for the reproducible development of aptamers (Neomers)

Cathal Meehan, Erika L. Hamilton, Chloé G. Mansour, Soizic Lecocq, Cole J. Drake, Yisi An, Emily Rodrigues, Gregory Penner

published 12 Feb 2025

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WDR75: An essential protein for ribosome assembly undergoing purifying selection

Lauren Lee, Justen B. Whittall

published 11 Feb 2025

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In Silico identification and characterization of SOS gene family in soybean: Potential of calcium in salinity stress mitigation

Anam Hameed, M. Asaf Khan, M. Hammad Nadeem Tahir, Madeeha Shahzad Lodhi, Saima Muzammil, Muhammad Shafiq, Tsanko Gechev, Muhammad Faisal

published 10 Feb 2025

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Highly sensitive molecular assay based on Identical Multi-Repeat Sequence (IMRS) algorithm for the detection of Trichomonas vaginalis infection

Clement Shiluli, Shwetha Kamath, Bernard N. Kanoi, Racheal Kimani, Bernard Oduor, Hussein M. Abkallo, Michael Maina, Harrison Waweru, Moses Kamita, Nicole Pamme, Joshua Dupaty, Catherine M. Klapperich, Srinivasa Raju Lolabattu, Jesse Gitaka

published 07 Feb 2025

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Comparisons of performances of structural variants detection algorithms in solitary or combination strategy

De-Min Duan, Chinyi Cheng, Yu-Shu Huang, An-ko Chung, Pin-Xuan Chen, Yu-An Chen, Jacob Shujui Hsu, Pei-Lung Chen

published 06 Feb 2025

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