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Biochemical simulations

A Conceptual Mathematical Model of the Dynamic Self-Organisation of Distinct Cellular Organelles

Bernd Binder, Andrean Goede, Nikolaus Berndt, Hermann-Georg Holzhütter

Steered Molecular Dynamics Simulations Reveal the Likelier Dissociation Pathway of Imatinib from Its Targeting Kinases c-Kit and Abl

Li-Jun Yang, Jun Zou, [ ... ], Sheng-Yong Yang

Striated Muscle Regulation of Isometric Tension by Multiple Equilibria

Henry G. Zot, Javier E. Hasbun, Nguyen Van Minh

Electroporating Fields Target Oxidatively Damaged Areas in the Cell Membrane

P. Thomas Vernier, Zachary A. Levine, [ ... ], D. Peter Tieleman

Hierarchical Structure Controls Nanomechanical Properties of Vimentin Intermediate Filaments

Zhao Qin, Laurent Kreplak, Markus J. Buehler

Modeling the Quantitative Specificity of DNA-Binding Proteins from Example Binding Sites

Dana S. F. Homsi, Vineet Gupta, Gary D. Stormo

Molecular Dynamics Simulation of Phosphorylated KID Post-Translational Modification

Hai-Feng Chen

Hsp70 Chaperones and Type I PRMTs Are Sequestered at Intranuclear Inclusions Caused by Polyalanine Expansions in PABPN1

João Paulo Tavanez, Rocio Bengoechea, [ ... ], Francisco J. Enguita

Multiple Aspects of ATP-Dependent Nucleosome Translocation by RSC and Mi-2 Are Directed by the Underlying DNA Sequence

Joke J. F. A. van Vugt, Martijn de Jager, [ ... ], Colin Logie

Coupled Stochastic Spatial and Non-Spatial Simulations of ErbB1 Signaling Pathways Demonstrate the Importance of Spatial Organization in Signal Transduction

Michelle N. Costa, Krishnan Radhakrishnan, [ ... ], Jeremy S. Edwards

Lys169 of Human Glucokinase Is a Determinant for Glucose Phosphorylation: Implication for the Atomic Mechanism of Glucokinase Catalysis

Jian Zhang, Chenjing Li, [ ... ], Hualiang Jiang

Biophysical Mechanism for Ras-Nanocluster Formation and Signaling in Plasma Membrane

Thomas Gurry, Ozan Kahramanoğulları, Robert G. Endres

Molecular Dynamics Simulation of Ligand Dissociation from Liver Fatty Acid Binding Protein

Dong Long, Yuguang Mu, Daiwen Yang

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