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Bacterial taxonomy

Metagenomic and taxonomic profiling of phyllosphere bacteria from Mangifera indica in response to urban air pollutants in Medellín, Colombia

Natalia Bernal Hernández, Héctor Alejandro Rodríguez Cabal, Nancy J. Pino, Sara Ramírez Restrepo, Luisa María Múnera Porras

published 28 Apr 2026

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Integrating natural gradients and controlled assays to reveal bacterial responses to cadmium in Theobroma cacao L., soils

Claudia Jaramillo-Mazo, Daniel Bravo, Diego Fernando Villanueva-Mejía, Javier Correa-Alvarez

published 24 Mar 2026

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Exploring anatomical and geographical drivers of the microbiota in wild capybaras (Hydrochoerus hydrochaeris): Baseline Data for zoonotic risk assessment

Milena Camargo, Jorge A. Marín-Sánchez, Plutarco Urbano, Nicolas Luna, Valentina Acevedo Ramírez, Julián A. Rodríguez, Davinzon Martínez, Carlos Porras, Luz H. Patiño, Marina Muñoz, Juan David Ramírez

published 23 Mar 2026

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Evaluation of shotgun metagenomics as a diagnostic tool for infectious gastroenteritis

Kjersti Haugum, Anuradha Ravi, Jan Egil Afset, Christina Gabrielsen Ås

published 02 Sep 2025

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Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, Guendouz Dif, Fawzia Chaabane Chaouch, Sherif S. Ebada

published 01 Jul 2025

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Exploring soil bacterial and fungal communities in Colombian terrestrial ecosystems modulated by altitude-influenced factors

Wendy Lorena Reyes-Ardila, Glever Alexander Vélez-Martínez, Juan Diego Duque-Zapata, Paula Andrea Rugeles-Silva, Jaime Eduardo Muñoz Flórez, Diana López-Álvarez

published 12 Dec 2024

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Environmental predictors impact microbial-based postmortem interval (PMI) estimation models within human decomposition soils

Allison R. Mason, Hayden S. McKee-Zech, Dawnie W. Steadman, Jennifer M. DeBruyn

published 11 Oct 2024

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A search for bacteria identified from cerebrospinal fluid shunt infections in previous surgical events

Paul Hodor, Christopher E. Pope, Kathryn B. Whitlock, Patrick J. McDonald, Jason Hauptman, Lucas R. Hoffman, David D. Limbrick Jr., Tamara D. Simon, on behalf of the Cerebrospinal FLuId MicroBiota in Shunts (CLIMB) Study Group

published 10 Oct 2024

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Bacterial diversity of cantaloupes and soil from Arizona and California commercial fields at the point of harvest

Madison Goforth, Victoria Obergh, Richard Park, Martin Porchas, Paul Brierley, Tom Turni, Bhimanagouda Patil, Sadhana Ravishankar, Steven Huynh, Craig T. Parker, Kerry K. Cooper

published 26 Sep 2024

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Gut microbiome in the Graves’ disease: Comparison before and after anti-thyroid drug treatment

Chaiho Jeong, Hansang Baek, Jaewoong Bae, Nakwon Hwang, Jeonghoon Ha, Young-Seok Cho, Dong-Jun Lim

published 31 May 2024

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Shotgun metagenomic analysis of saliva microbiome suggests Mogibacterium as a factor associated with chronic bacterial osteomyelitis

Hiroko Yahara, Souichi Yanamoto, Miho Takahashi, Yuji Hamada, Takuya Asaka, Yoshimasa Kitagawa, Kuniyasu Moridera, Kazuma Noguchi, Yutaka Maruoka, Koji Yahara

published 06 May 2024

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Detection of pathogenic bacteria in ticks from Isiolo and Kwale counties of Kenya using metagenomics

Bryson Brian Kimemia, Lillian Musila, Solomon Langat, Erick Odoyo, Stephanie Cinkovich, David Abuom, Santos Yalwala, Samoel Khamadi, Jaree Johnson, Eric Garges, Elly Ojwang, Fredrick Eyase

published 30 Apr 2024

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Exploring the interplay between the core microbiota, physicochemical factors, agrobiochemical cycles in the soil of the historic tokaj mád wine region

Judit Remenyik, László Csige, Péter Dávid, Péter Fauszt, Anna Anita Szilágyi-Rácz, Erzsébet Szőllősi, Zsófia Réka Bacsó, István Szepsy Jnr, Krisztina Molnár, Csaba Rácz, Gábor Fidler, Zoltán Kállai, László Stündl, Attila Csaba Dobos, Melinda Paholcsek

published 16 Apr 2024

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